Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_G24
(879 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525... 38 0.011
09_02_0206 - 5783868-5783986,5784422-5784485,5784552-5784620,578... 32 0.70
07_03_1632 + 28271559-28271645,28272641-28272713,28273030-282733... 31 0.92
02_05_1273 + 35381626-35382486,35382567-35382691,35384851-353854... 30 2.8
02_05_0938 + 32901143-32901215,32901841-32901982,32902243-329023... 29 3.7
11_06_0459 + 23830204-23830350,23830419-23830592,23830738-238308... 29 4.9
11_06_0276 - 21826458-21826640,21826716-21826787,21826869-218269... 29 4.9
05_01_0088 + 581619-581854,581890-582035,583143-583263,583593-58... 29 4.9
02_01_0220 + 1444219-1444414,1444535-1444635,1445449-1446174 29 6.5
09_01_0032 - 541411-541737,542751-543752 28 8.6
07_03_1107 - 24024387-24024497,24025799-24026410 28 8.6
>11_06_0388 +
23048576-23051546,23051830-23052371,23052444-23052517,
23053006-23053090,23053281-23053367,23053585-23053657,
23053882-23053925,23054041-23054169,23054301-23054402,
23054529-23054585
Length = 1387
Score = 37.9 bits (84), Expect = 0.011
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 527 SADEESLIRREAPLPIQQTQAQFPDSISMDNSNLSVGAYXNTDVRILLECLAKRIALIDQ 706
S DE PLP+Q TQ + SIS D+S + A D +IL ++R+ ++++
Sbjct: 108 SGDERDEAAPPPPLPVQDTQLRKSKSISCDSSTMEANA---GDGKILARTSSRRVTILER 164
Query: 707 RF-RASLK 727
F R S+K
Sbjct: 165 MFGRKSIK 172
>09_02_0206 -
5783868-5783986,5784422-5784485,5784552-5784620,
5784698-5784940,5786844-5786912,5786988-5787212,
5787289-5787532,5787607-5787716,5787948-5788016,
5788988-5789042,5789063-5789097,5789422-5789514,
5789545-5789595
Length = 481
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 521 DLSADEESLIRREAPLPIQQTQAQFPDSISMDNSNLSVGA 640
D +DE + +RR AP Q QA + D++++D ++ GA
Sbjct: 439 DGESDEHNRVRRNAPYAGSQHQANYADAMAVDGGHMLGGA 478
>07_03_1632 +
28271559-28271645,28272641-28272713,28273030-28273361,
28273455-28274791,28275451-28275848,28275963-28277644,
28277727-28277884,28278645-28278802,28279110-28279270,
28279826-28280014
Length = 1524
Score = 31.5 bits (68), Expect = 0.92
Identities = 31/160 (19%), Positives = 69/160 (43%), Gaps = 2/160 (1%)
Frame = +2
Query: 152 SFQNARLREMSDDDMKRIAAQIMVNKSTFNCESSSGILDLERVEAFGESVSENISLSKST 331
S + L +++++++ + ++ + N SSS L+ +R +V E + S+S
Sbjct: 409 SSKETLLNDINEENVSKSESRRSQKEQNMNASSSSDFLEDDRGVLSSGAVKERKNDSQSK 468
Query: 332 AFNPGEMTGRSTGADEINSKTAPINRHSVTLDSITNKMNRQTLEVQDIMRHSIA--SEFS 505
+ +PG + D + P + D++ N L + I ++ S+
Sbjct: 469 SSHPGRKPKAKSHRDV--REHLPEGSYGGKDDTLENGSGLGELRPKKIWKNDSERDSDMP 526
Query: 506 FQSKRDLSADEESLIRREAPLPIQQTQAQFPDSISMDNSN 625
SKR++S S ++ + P ++ + P S+S +N
Sbjct: 527 GTSKREIS----SSLKNDRHTPAEEQRMHVPPSVSAPTAN 562
>02_05_1273 +
35381626-35382486,35382567-35382691,35384851-35385450,
35385550-35385841,35386199-35386364,35386664-35386707,
35386866-35386979,35387171-35387290,35387541-35387626,
35388340-35388502
Length = 856
Score = 29.9 bits (64), Expect = 2.8
Identities = 39/175 (22%), Positives = 65/175 (37%), Gaps = 11/175 (6%)
Frame = +2
Query: 95 NPIMTPNKIQRLLNLAEDRSFQNARL-REMSDDDMKRIAAQIMVNKSTFNCESSSGILDL 271
+P P+ +Q L RS + RE S D R + + + T N + +
Sbjct: 132 SPTAPPSLLQMWRELEHRRSDADQPFDREPSPDTADRERVRQIARRLTANTDVPTAAAAA 191
Query: 272 ERV-EAFGESVSENISLSKS---TAFNPGEMTGRS----TGADEINSKTAP--INRHSVT 421
E GE+ + + L + A P + S T A E + P +
Sbjct: 192 ATTGEWLGETERQRVRLVREWVQMASQPRDSRVASRRDDTAAGERERRGEPPRLRGRQAR 251
Query: 422 LDSITNKMNRQTLEVQDIMRHSIASEFSFQSKRDLSADEESLIRREAPLPIQQTQ 586
LD IT + E+Q I + I SEF +S+ + R LP+++ +
Sbjct: 252 LDVITRMARERQRELQGISGYHIVSEFPHRSRNRIQGLLRGRFLRNVVLPVEEEE 306
>02_05_0938 +
32901143-32901215,32901841-32901982,32902243-32902314,
32902573-32902644,32902711-32902782,32902913-32902948,
32903001-32903072,32903319-32903387,32903483-32903554,
32903668-32903739,32903838-32903909,32904153-32904224,
32904470-32904541,32904623-32904694,32904782-32904853,
32904911-32905003,32905150-32905218,32905315-32905386,
32905479-32905552,32905643-32905771,32905966-32906331,
32906584-32906954,32907522-32907890
Length = 884
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 230 STFNCESSSGILDLERVEAFGESVSEN 310
ST +CE+SS D E FGE +S+N
Sbjct: 856 STLSCENSSSASDAELFLKFGEVISQN 882
>11_06_0459 +
23830204-23830350,23830419-23830592,23830738-23830865,
23830947-23831065,23831136-23831217,23831303-23831441,
23831624-23831778,23831852-23832149,23832325-23832453,
23832529-23832711,23832840-23832899,23832973-23833101,
23833177-23833359,23833446-23833490,23833576-23833665,
23833806-23833892,23833974-23834045,23834120-23834302
Length = 800
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Frame = +2
Query: 218 MVNKSTFNCESSSGILDLERVE-AFGESVSENISLSKSTAFNPGEMTG-RSTGADEINSK 391
+ NKS C G DL++ E FG+ + K+ + + EM R T + N +
Sbjct: 515 IANKSMLKCNDDYGFTDLQKSEDEFGQHNFQVKEEPKNESSDDYEMNNHRKTKKERSNMR 574
Query: 392 TAPINRHSVTLDSITNKMNRQTLEVQDIMRHSIASEF 502
+ + K N + + + D S+ F
Sbjct: 575 CTKRSNKEPYITDFDGKTNEKAITIDDDCEESLDDYF 611
>11_06_0276 -
21826458-21826640,21826716-21826787,21826869-21826955,
21827096-21827185,21827271-21827315,21827402-21827584,
21827660-21827788,21827862-21827921,21828050-21828232,
21828308-21828436,21828612-21828909,21828983-21829137,
21829320-21829458,21829544-21829625,21829696-21829814,
21829896-21830023,21830169-21830342,21830411-21830557
Length = 800
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Frame = +2
Query: 218 MVNKSTFNCESSSGILDLERVE-AFGESVSENISLSKSTAFNPGEMTG-RSTGADEINSK 391
+ NKS C G DL++ E FG+ + K+ + + EM R T + N +
Sbjct: 515 IANKSMLKCNDDYGFTDLQKSEDEFGQHNFQVKEEPKNESSDDYEMNNHRKTKKERSNMR 574
Query: 392 TAPINRHSVTLDSITNKMNRQTLEVQDIMRHSIASEF 502
+ + K N + + + D S+ F
Sbjct: 575 CTKRSNKEPYITDFDGKTNEKAITIDDDCEESLDDYF 611
>05_01_0088 +
581619-581854,581890-582035,583143-583263,583593-583773,
583842-584015,584161-584288,584370-584488,584559-584640,
584726-584864,585047-585201,585275-585572,585748-585876,
585952-586134,586263-586322,586396-586524,586600-586782,
586869-586913,586999-587088,587229-587315,587397-587468,
587813-587887
Length = 943
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Frame = +2
Query: 218 MVNKSTFNCESSSGILDLERVE-AFGESVSENISLSKSTAFNPGEMTG-RSTGADEINSK 391
+ NKS C G DL++ E FG+ + K+ + + EM R T + N +
Sbjct: 694 IANKSMLKCNDDYGFTDLQKSEDEFGQHNFQIKEEPKNESSDDYEMNNHRKTKKERSNMR 753
Query: 392 TAPINRHSVTLDSITNKMNRQTLEVQDIMRHSIASEF 502
+ + K N + + + D S+ F
Sbjct: 754 CTKRSNKEPYITDFDGKTNEKAITIDDDCEESLDDYF 790
>02_01_0220 + 1444219-1444414,1444535-1444635,1445449-1446174
Length = 340
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 673 MLGKTDSPDRSAFPSVTEASTNATSKXXQRIXYHYG 780
M G S S + +V +AST ATS R+ Y YG
Sbjct: 186 MTGDFPSKPMSIYATVWDASTWATSGGRYRVNYRYG 221
>09_01_0032 - 541411-541737,542751-543752
Length = 442
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/88 (20%), Positives = 41/88 (46%)
Frame = +2
Query: 401 INRHSVTLDSITNKMNRQTLEVQDIMRHSIASEFSFQSKRDLSADEESLIRREAPLPIQQ 580
+NRHS + E++ + RH++ E + +K + DE+ + E P+P
Sbjct: 163 VNRHSTGEADEGEDIPAIVEEIERVDRHAVKDEENLGAKENDDEDEQEV--EEVPMP-AS 219
Query: 581 TQAQFPDSISMDNSNLSVGAYXNTDVRI 664
+ P I++++ + S+ Y + + +
Sbjct: 220 WNLEDPSYIAVNSCHDSIWFYGDGQINL 247
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -1
Query: 378 SSAPVDRPVISPGLNAVDLLRDIFSETDSPKASTRSKSKIPEEDSQLK 235
SS PV+ PV SP A + I ++ D+P A +K K P S+ K
Sbjct: 110 SSPPVEAPVASPPSPAAEAPATIPTKPDAP-APAPAKKKKPSPPSKKK 156
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,135,567
Number of Sequences: 37544
Number of extensions: 361358
Number of successful extensions: 842
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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