Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_G24
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 30 2.5
U47144-1|AAB52616.2| 448|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p... 29 5.8
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p... 29 5.8
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated... 29 5.8
AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated... 29 5.8
AF022985-13|AAB69968.1| 375|Caenorhabditis elegans Hypothetical... 29 5.8
Z37092-2|CAA85453.1| 555|Caenorhabditis elegans Hypothetical pr... 28 7.7
AL117203-12|CAB60423.1| 487|Caenorhabditis elegans Hypothetical... 28 7.7
>U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical
protein C50F7.10 protein.
Length = 479
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -2
Query: 710 NADLSGLSVLPSIRAKSGHLYXNKLPLIS*SCPLKYCQETELVSAVLVAELPF 552
N D G S SIR+++G ++ N P +S LKY ++ L+S + V F
Sbjct: 27 NLDGRGFSTWDSIRSENGRIHDNSDPDLSCEGRLKYKEDVALLSKIGVTSYRF 79
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 679 GKTDSPDRSAFPSVTEA 729
G+TD PD S+FPS TEA
Sbjct: 866 GETDPPDLSSFPSTTEA 882
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 679 GKTDSPDRSAFPSVTEA 729
G+TD PD S+FPS TEA
Sbjct: 866 GETDPPDLSSFPSTTEA 882
>U47144-1|AAB52616.2| 448|Caenorhabditis elegans Hypothetical
protein ZC53.1 protein.
Length = 448
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/55 (27%), Positives = 33/55 (60%)
Frame = +2
Query: 311 ISLSKSTAFNPGEMTGRSTGADEINSKTAPINRHSVTLDSITNKMNRQTLEVQDI 475
IS+ +TAF+ G TGR+T +++ + P + L +++++ R+T++ D+
Sbjct: 45 ISIGGNTAFDQGSSTGRTT-SNQPEKASVP---QPLPLTRVSDRVRRRTVQFADV 95
>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
protein C53B4.4e protein.
Length = 1544
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 387 EFISSAPVDRPVISPGLNAVDLLRDIFSETDS-PKASTRSKSKIPEEDSQLKVDLLT 220
E IS++ +D P ++PG + +D R + ++ S P +S PE + + +T
Sbjct: 1287 EEISASELDHPSVTPGDHQIDETRSLIMQSPSTPSSSIAGSLDTPEMSKRARFRKVT 1343
>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
protein C53B4.4d protein.
Length = 1301
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 387 EFISSAPVDRPVISPGLNAVDLLRDIFSETDS-PKASTRSKSKIPEEDSQLKVDLLT 220
E IS++ +D P ++PG + +D R + ++ S P +S PE + + +T
Sbjct: 1007 EEISASELDHPSVTPGDHQIDETRSLIMQSPSTPSSSIAGSLDTPEMSKRARFRKVT 1063
>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical protein
C53B4.4c protein.
Length = 1304
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 387 EFISSAPVDRPVISPGLNAVDLLRDIFSETDS-PKASTRSKSKIPEEDSQLKVDLLT 220
E IS++ +D P ++PG + +D R + ++ S P +S PE + + +T
Sbjct: 1007 EEISASELDHPSVTPGDHQIDETRSLIMQSPSTPSSSIAGSLDTPEMSKRARFRKVT 1063
>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
C53B4.4b protein.
Length = 1586
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 387 EFISSAPVDRPVISPGLNAVDLLRDIFSETDS-PKASTRSKSKIPEEDSQLKVDLLT 220
E IS++ +D P ++PG + +D R + ++ S P +S PE + + +T
Sbjct: 1289 EEISASELDHPSVTPGDHQIDETRSLIMQSPSTPSSSIAGSLDTPEMSKRARFRKVT 1345
>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
C53B4.4a protein.
Length = 1584
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 387 EFISSAPVDRPVISPGLNAVDLLRDIFSETDS-PKASTRSKSKIPEEDSQLKVDLLT 220
E IS++ +D P ++PG + +D R + ++ S P +S PE + + +T
Sbjct: 1287 EEISASELDHPSVTPGDHQIDETRSLIMQSPSTPSSSIAGSLDTPEMSKRARFRKVT 1343
>AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated
protein 57, isoform a protein.
Length = 377
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +2
Query: 44 GLKKSYDCVRNKVRKMDNPIMTPNKIQRLLNLAEDRSFQNARLREMSDDDMKR--IAAQI 217
G + YDC + + R+ D I K++ LAE F N ++ R I AQ+
Sbjct: 163 GRRLDYDCKKRQQRRDDEMIQAEEKLEESKRLAEMSMF-NVLSNDVEQISQLRALIEAQL 221
Query: 218 MVNKSTFNC 244
++ T C
Sbjct: 222 DFHRQTAQC 230
>AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated
protein 57, isoform c protein.
Length = 379
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +2
Query: 44 GLKKSYDCVRNKVRKMDNPIMTPNKIQRLLNLAEDRSFQNARLREMSDDDMKR--IAAQI 217
G + YDC + + R+ D I K++ LAE F N ++ R I AQ+
Sbjct: 163 GRRLDYDCKKRQQRRDDEMIQAEEKLEESKRLAEMSMF-NVLSNDVEQISQLRALIEAQL 221
Query: 218 MVNKSTFNC 244
++ T C
Sbjct: 222 DFHRQTAQC 230
>AF022985-13|AAB69968.1| 375|Caenorhabditis elegans Hypothetical
protein T15B7.15 protein.
Length = 375
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +2
Query: 14 RLTIGNSLRFGLKKSYDCVRNKVR-KMDNPIMTPNKIQRLLNLAEDRSFQNARLREMSDD 190
RL + R + Y + N++ K+D + +K Q++ +L ED+ + + R+ + D
Sbjct: 263 RLEESENKRKTTLEKYIQIENELNSKLDEALQNSDKCQKMTSLLEDQLLREQQTRKATID 322
Query: 191 DMKRIAAQIMVNKSTFN--CESSSGILD 268
K +I K F S G+LD
Sbjct: 323 SHKAQNKKIEELKVFFKDVLSSEEGLLD 350
>Z37092-2|CAA85453.1| 555|Caenorhabditis elegans Hypothetical
protein F44F4.2 protein.
Length = 555
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/71 (22%), Positives = 32/71 (45%)
Frame = +2
Query: 143 EDRSFQNARLREMSDDDMKRIAAQIMVNKSTFNCESSSGILDLERVEAFGESVSENISLS 322
E S AR+ + S++ ++ ++V F+C + + + R++ S + S
Sbjct: 169 EHVSMVAARIAKFSEEMSSKVKWSLLVEPGKFSCHLTEFVQEFNRLDRMFVSNELSDEES 228
Query: 323 KSTAFNPGEMT 355
TAFN +T
Sbjct: 229 LQTAFNANYLT 239
>AL117203-12|CAB60423.1| 487|Caenorhabditis elegans Hypothetical
protein Y48C3A.20 protein.
Length = 487
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 206 AAQIMVNKSTFNCESSSGILDLERVEAFGESVSENIS 316
A ++ +++F C+ GI+D ++ GE V E +S
Sbjct: 22 AEEVTKCENSFECQLCFGIMDQAMIDEVGEKVQEELS 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,031,226
Number of Sequences: 27780
Number of extensions: 340890
Number of successful extensions: 995
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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