Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_G19
(913 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0364 - 2856598-2857059 100 2e-21
03_02_0560 + 9462996-9463454 100 3e-21
01_06_1288 - 36007432-36007851 100 3e-21
05_07_0203 + 28391707-28392165 99 4e-21
01_01_0366 + 2871188-2871655 99 4e-21
08_02_1090 + 24254172-24254624 98 1e-20
01_01_0360 - 2837046-2837507 98 1e-20
01_01_0362 - 2843659-2844468,2844669-2844699,2844824-2844903,284... 97 2e-20
01_01_0358 - 2819235-2819696 97 2e-20
01_01_0331 + 2685802-2686263 97 2e-20
01_01_0329 + 2673479-2673940 97 2e-20
05_05_0111 + 22479971-22480093,22480238-22480471 87 2e-17
09_06_0354 - 22490833-22491417 76 5e-14
08_02_1089 + 24250953-24251123 58 1e-08
06_03_0129 - 16993968-16994158,16994354-16994540,16997204-169975... 29 3.9
05_04_0454 + 21383068-21384525 29 3.9
01_06_1810 - 40049677-40049951,40050032-40050112,40050201-400503... 29 5.1
>01_01_0364 - 2856598-2857059
Length = 153
Score = 100 bits (239), Expect = 2e-21
Identities = 46/88 (52%), Positives = 69/88 (78%)
Frame = +3
Query: 189 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 368
+++ IY++K+L+ V D +GIS K+M IMN+F+ND+ EK+A EA +L + KK T+ SRE
Sbjct: 64 ETYKIYIFKVLKQVHPD-IGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 122
Query: 369 IQSAVKLLVPGELATHANSEGMKAISMY 452
IQ+AV+L++PGELA HA SEG KA++ +
Sbjct: 123 IQTAVRLVLPGELAKHAVSEGTKAVTKF 150
>03_02_0560 + 9462996-9463454
Length = 152
Score = 99.5 bits (237), Expect = 3e-21
Identities = 46/88 (52%), Positives = 69/88 (78%)
Frame = +3
Query: 189 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 368
+++ IY++K+L+ V D +GIS K+M IMN+F+ND+ EK+A EA RL + KK T+ SRE
Sbjct: 63 ETYKIYIFKVLKQVHPD-IGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSRE 121
Query: 369 IQSAVKLLVPGELATHANSEGMKAISMY 452
IQ++V+L++PGELA HA SEG KA++ +
Sbjct: 122 IQTSVRLVLPGELAKHAVSEGTKAVTKF 149
>01_06_1288 - 36007432-36007851
Length = 139
Score = 99.5 bits (237), Expect = 3e-21
Identities = 46/88 (52%), Positives = 69/88 (78%)
Frame = +3
Query: 189 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 368
+++ IY++K+L+ V D +GIS K+M IMN+F+ND+ EK+A EA RL + KK T+ SRE
Sbjct: 50 ETYKIYIFKVLKQVHPD-IGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSRE 108
Query: 369 IQSAVKLLVPGELATHANSEGMKAISMY 452
IQ++V+L++PGELA HA SEG KA++ +
Sbjct: 109 IQTSVRLVLPGELAKHAVSEGTKAVTKF 136
>05_07_0203 + 28391707-28392165
Length = 152
Score = 99.1 bits (236), Expect = 4e-21
Identities = 45/88 (51%), Positives = 69/88 (78%)
Frame = +3
Query: 189 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 368
+++ IY++K+L+ V D +GIS K+M IMN+F+ND+ EK+A EA +L + KK T+ SRE
Sbjct: 63 ETYKIYIFKVLKQVHPD-IGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 121
Query: 369 IQSAVKLLVPGELATHANSEGMKAISMY 452
IQ++V+L++PGELA HA SEG KA++ +
Sbjct: 122 IQTSVRLVLPGELAKHAVSEGTKAVTKF 149
>01_01_0366 + 2871188-2871655
Length = 155
Score = 99.1 bits (236), Expect = 4e-21
Identities = 45/88 (51%), Positives = 69/88 (78%)
Frame = +3
Query: 189 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 368
+++ IY++K+L+ V D +GIS K+M IMN+F+ND+ EK+A EA +L + KK T+ SRE
Sbjct: 66 ETYKIYIFKVLKQVHPD-IGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTITSRE 124
Query: 369 IQSAVKLLVPGELATHANSEGMKAISMY 452
IQ++V+L++PGELA HA SEG KA++ +
Sbjct: 125 IQTSVRLVLPGELAKHAVSEGTKAVTKF 152
>08_02_1090 + 24254172-24254624
Length = 150
Score = 97.9 bits (233), Expect = 1e-20
Identities = 45/88 (51%), Positives = 69/88 (78%)
Frame = +3
Query: 189 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 368
+++ IY++K+L+ V D +GIS K+M IMN+F+ND+ EK+A EA +L + KK T+ SRE
Sbjct: 61 ETYKIYIFKVLKQVHPD-IGISSKAMSIMNSFINDIFEKLAGEAAKLARYNKKPTITSRE 119
Query: 369 IQSAVKLLVPGELATHANSEGMKAISMY 452
IQ++V+L++PGELA HA SEG KA++ +
Sbjct: 120 IQTSVRLVLPGELAKHAVSEGTKAVTKF 147
>01_01_0360 - 2837046-2837507
Length = 153
Score = 97.9 bits (233), Expect = 1e-20
Identities = 45/88 (51%), Positives = 69/88 (78%)
Frame = +3
Query: 189 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 368
+++ IY++K+L+ V D +GIS K+M IMN+F+ND+ EK+A E+ +L + KK T+ SRE
Sbjct: 64 ETYKIYIFKVLKQVHPD-IGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSRE 122
Query: 369 IQSAVKLLVPGELATHANSEGMKAISMY 452
IQ+AV+L++PGELA HA SEG KA++ +
Sbjct: 123 IQTAVRLVLPGELAKHAVSEGTKAVTKF 150
>01_01_0362 -
2843659-2844468,2844669-2844699,2844824-2844903,
2846680-2847831
Length = 690
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/88 (50%), Positives = 69/88 (78%)
Frame = +3
Query: 189 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 368
+++ IY++K+L+ V D +GIS K+M IMN+F+ND+ EK+A E+ +L + KK T+ SRE
Sbjct: 601 ETYKIYIFKVLKQVHPD-IGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSRE 659
Query: 369 IQSAVKLLVPGELATHANSEGMKAISMY 452
IQ++V+L++PGELA HA SEG KA++ +
Sbjct: 660 IQTSVRLVLPGELAKHAVSEGTKAVTKF 687
>01_01_0358 - 2819235-2819696
Length = 153
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/88 (50%), Positives = 69/88 (78%)
Frame = +3
Query: 189 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 368
+++ IY++K+L+ V D +GIS K+M IMN+F+ND+ EK+A E+ +L + KK T+ SRE
Sbjct: 64 ETYKIYIFKVLKQVHPD-IGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSRE 122
Query: 369 IQSAVKLLVPGELATHANSEGMKAISMY 452
IQ++V+L++PGELA HA SEG KA++ +
Sbjct: 123 IQTSVRLVLPGELAKHAVSEGTKAVTKF 150
>01_01_0331 + 2685802-2686263
Length = 153
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/88 (50%), Positives = 69/88 (78%)
Frame = +3
Query: 189 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 368
+++ IY++K+L+ V D +GIS K+M IMN+F+ND+ EK+A E+ +L + KK T+ SRE
Sbjct: 64 ETYKIYIFKVLKQVHPD-IGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSRE 122
Query: 369 IQSAVKLLVPGELATHANSEGMKAISMY 452
IQ++V+L++PGELA HA SEG KA++ +
Sbjct: 123 IQTSVRLVLPGELAKHAVSEGTKAVTKF 150
>01_01_0329 + 2673479-2673940
Length = 153
Score = 96.7 bits (230), Expect = 2e-20
Identities = 44/88 (50%), Positives = 69/88 (78%)
Frame = +3
Query: 189 QSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSRE 368
+++ IY++K+L+ V D +GIS K+M IMN+F+ND+ EK+A E+ +L + KK T+ SRE
Sbjct: 64 ETYKIYIFKVLKQVHPD-IGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSRE 122
Query: 369 IQSAVKLLVPGELATHANSEGMKAISMY 452
IQ++V+L++PGELA HA SEG KA++ +
Sbjct: 123 IQTSVRLVLPGELAKHAVSEGTKAVTKF 150
>05_05_0111 + 22479971-22480093,22480238-22480471
Length = 118
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/71 (56%), Positives = 56/71 (78%)
Frame = +3
Query: 240 NLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHA 419
++GIS K+M IMN+FVND+ EK+ EA RL + KK T+ SREIQ++V+L++PGELA HA
Sbjct: 45 DIGISSKAMSIMNSFVNDIFEKLEQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHA 104
Query: 420 NSEGMKAISMY 452
SEG KA++ +
Sbjct: 105 VSEGTKAVTKF 115
>09_06_0354 - 22490833-22491417
Length = 194
Score = 75.8 bits (178), Expect = 5e-14
Identities = 40/89 (44%), Positives = 60/89 (67%)
Frame = +3
Query: 186 YQSFSIYLYKLLRAVTQDNLGISRKSMLIMNNFVNDMLEKIAVEAGRLVAHGKKNTLGSR 365
Y + Y++++L+ V D LG S ++M +++ + DM E++A EA RL + TL SR
Sbjct: 105 YGGYKRYVWRVLKQVHPD-LGASAQTMDVLDMMMADMFERLADEASRLSKLSGRLTLTSR 163
Query: 366 EIQSAVKLLVPGELATHANSEGMKAISMY 452
E+QSAV+L++P +LA HA SEG KAIS Y
Sbjct: 164 EVQSAVRLVLPADLANHAISEGTKAISNY 192
>08_02_1089 + 24250953-24251123
Length = 56
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = +3
Query: 294 MLEKIAVEAGRLVAHGKKNTLGSREIQSAVKLLVPGELATHANSEGMKAISMY 452
M EK+ EA +L + KK T+ SREIQ++V+L++ GELA HA SEG KA++ +
Sbjct: 1 MFEKLVGEAAKLARYNKKPTITSREIQTSVRLVLLGELAKHAVSEGAKAVTKF 53
>06_03_0129 -
16993968-16994158,16994354-16994540,16997204-16997517,
16997600-16997828
Length = 306
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 215 ITEGRHARQPGHLEEVDVDHE*LR*RYAGEDRRGSRKAGRPRQEEYSG 358
+ EG G +E+D+ LR R + ++RG K+G PR E G
Sbjct: 215 VNEGLGEHGGGGEDEIDLGGPMLRPRGSAANKRGKAKSGWPRGESCGG 262
>05_04_0454 + 21383068-21384525
Length = 485
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 290 RYAGEDRRGSRKAGRPRQ-EEYSGQQRNPICRQVTSTGRAGHTRQLRGHEGHKHVPFEQK 466
+YAGED GSR+ +Q + + GQQR+ + A R + K+ EQ+
Sbjct: 394 QYAGEDSYGSRQIPANQQHQHFRGQQRHVVKPYYARGFDASDDRATNAGKQAKYDHPEQQ 453
Query: 467 ERLQKQ 484
+R +Q
Sbjct: 454 QRAYQQ 459
>01_06_1810 -
40049677-40049951,40050032-40050112,40050201-40050371,
40050434-40050497,40050689-40050777,40051244-40051378,
40051464-40051515
Length = 288
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 329 QPSGFHGDLLQHIVNEVIH 273
+P GFHGD+ H +N+ IH
Sbjct: 220 KPCGFHGDVTLHDINQRIH 238
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,223,970
Number of Sequences: 37544
Number of extensions: 319234
Number of successful extensions: 806
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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