Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_G18
         (886 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030241-1|ABN49380.1|   74|Drosophila melanogaster IP18279p pro...    36   0.056
AE014297-4641|AAN14249.1|  659|Drosophila melanogaster CG31019-P...    30   3.7  
X95453-2|CAA64723.1|  980|Drosophila melanogaster homologous to ...    29   8.5  
AE014297-1114|AAO41538.2|  981|Drosophila melanogaster CG3985-PF...    29   8.5  
AE014297-1112|AAF54506.3| 1041|Drosophila melanogaster CG3985-PD...    29   8.5  

>BT030241-1|ABN49380.1|   74|Drosophila melanogaster IP18279p
           protein.
          Length = 74

 Score = 36.3 bits (80), Expect = 0.056
 Identities = 15/52 (28%), Positives = 30/52 (57%)
 Frame = +1

Query: 601 RASQKSTLXSEVAXPDRTIKIPGVPPGSSLVRSPVPTLPLTGYLSAFXPSGS 756
           R S++ T+        +++ +P VPP  +  RS +P  P++G +++  P+GS
Sbjct: 8   RISKEYTIMGCCFGKSKSVDLPAVPPAPAKQRSTLPEFPISGSVTSTAPAGS 59


>AE014297-4641|AAN14249.1|  659|Drosophila melanogaster CG31019-PA
           protein.
          Length = 659

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 732 QVSGKRQGRNRRAHEGASRGNAWYLYSP 649
           +V  KR+GRNR AH   SR    Y   P
Sbjct: 491 EVRSKRRGRNRHAHHSRSRSKTRYEVKP 518


>X95453-2|CAA64723.1|  980|Drosophila melanogaster homologous to
           synapsin I protein.
          Length = 980

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = -3

Query: 716 GRVGTGERTRELPGGTPGIFIVLSGFATSXLSVDFCDARQGGGAYGKTPATRP 558
           GR  +   +   PG  P      SGF++S L   F  A +G G     P  RP
Sbjct: 545 GRTASETSSGSGPGSVPSSAGPGSGFSSSFLGKQFSFAGKGEGVISTQPTQRP 597


>AE014297-1114|AAO41538.2|  981|Drosophila melanogaster CG3985-PF,
           isoform F protein.
          Length = 981

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = -3

Query: 716 GRVGTGERTRELPGGTPGIFIVLSGFATSXLSVDFCDARQGGGAYGKTPATRP 558
           GR  +   +   PG  P      SGF++S L   F  A +G G     P  RP
Sbjct: 546 GRTASETSSGSGPGSVPSSAGPGSGFSSSFLGKQFSFAGKGEGVISTQPTQRP 598


>AE014297-1112|AAF54506.3| 1041|Drosophila melanogaster CG3985-PD,
           isoform D protein.
          Length = 1041

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = -3

Query: 716 GRVGTGERTRELPGGTPGIFIVLSGFATSXLSVDFCDARQGGGAYGKTPATRP 558
           GR  +   +   PG  P      SGF++S L   F  A +G G     P  RP
Sbjct: 606 GRTASETSSGSGPGSVPSSAGPGSGFSSSFLGKQFSFAGKGEGVISTQPTQRP 658


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,082,723
Number of Sequences: 53049
Number of extensions: 628451
Number of successful extensions: 1437
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1437
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)