Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_G17
         (877 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U93239-1|AAB51391.1|  399|Homo sapiens Sec62 protein.                  49   3e-05
D87127-1|BAA13254.1|  399|Homo sapiens translocation protein-1 p...    49   3e-05
BC012035-1|AAH12035.1|  399|Homo sapiens TLOC1 protein protein.        49   3e-05
BC003677-1|AAH03677.1|  169|Homo sapiens Unknown (protein for IM...    49   3e-05
AB024586-1|BAB12685.1|  399|Homo sapiens translocation protein 1...    49   3e-05
BC105971-1|AAI05972.1|  104|Homo sapiens TLOC1 protein protein.        38   0.063
AB065858-1|BAC06076.1|  335|Homo sapiens seven transmembrane hel...    32   2.4  
AB065800-1|BAC06019.1|  325|Homo sapiens seven transmembrane hel...    32   3.1  
DQ431494-1|ABE97223.1|  125|Homo sapiens anti-Rh(D) antibody imm...    31   7.2  
DQ431493-1|ABE97222.1|  123|Homo sapiens anti-Rh(D) antibody imm...    30   9.6  

>U93239-1|AAB51391.1|  399|Homo sapiens Sec62 protein.
          Length = 399

 Score = 48.8 bits (111), Expect = 3e-05
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = +3

Query: 210 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALFDFK 323
           AVAK+L+ N PTK T  + H V+YF  +KAVD L D K
Sbjct: 23  AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSK 60



 Score = 37.5 bits (83), Expect = 0.063
 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +1

Query: 313 LTSKWAT---GKNPAFTTRIEVTHYLHRMLLHKLFHRAKKV 426
           L SKWA    G+   FTTR  V  Y +R+L  + FHRA KV
Sbjct: 57  LDSKWAKAKKGEEALFTTRESVVDYCNRLLKKQFFHRALKV 97


>D87127-1|BAA13254.1|  399|Homo sapiens translocation protein-1
           protein.
          Length = 399

 Score = 48.8 bits (111), Expect = 3e-05
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = +3

Query: 210 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALFDFK 323
           AVAK+L+ N PTK T  + H V+YF  +KAVD L D K
Sbjct: 23  AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSK 60



 Score = 37.5 bits (83), Expect = 0.063
 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +1

Query: 313 LTSKWAT---GKNPAFTTRIEVTHYLHRMLLHKLFHRAKKV 426
           L SKWA    G+   FTTR  V  Y +R+L  + FHRA KV
Sbjct: 57  LDSKWAKAKKGEEALFTTRESVVDYCNRLLKKQFFHRALKV 97


>BC012035-1|AAH12035.1|  399|Homo sapiens TLOC1 protein protein.
          Length = 399

 Score = 48.8 bits (111), Expect = 3e-05
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = +3

Query: 210 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALFDFK 323
           AVAK+L+ N PTK T  + H V+YF  +KAVD L D K
Sbjct: 23  AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSK 60



 Score = 37.5 bits (83), Expect = 0.063
 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +1

Query: 313 LTSKWAT---GKNPAFTTRIEVTHYLHRMLLHKLFHRAKKV 426
           L SKWA    G+   FTTR  V  Y +R+L  + FHRA KV
Sbjct: 57  LDSKWAKAKKGEEALFTTRESVVDYCNRLLKKQFFHRALKV 97


>BC003677-1|AAH03677.1|  169|Homo sapiens Unknown (protein for
           IMAGE:3932691) protein.
          Length = 169

 Score = 48.8 bits (111), Expect = 3e-05
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = +3

Query: 210 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALFDFK 323
           AVAK+L+ N PTK T  + H V+YF  +KAVD L D K
Sbjct: 23  AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSK 60



 Score = 37.5 bits (83), Expect = 0.063
 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +1

Query: 313 LTSKWAT---GKNPAFTTRIEVTHYLHRMLLHKLFHRAKKV 426
           L SKWA    G+   FTTR  V  Y +R+L  + FHRA KV
Sbjct: 57  LDSKWAKAKKGEEALFTTRESVVDYCNRLLKKQFFHRALKV 97


>AB024586-1|BAB12685.1|  399|Homo sapiens translocation protein 1
           protein.
          Length = 399

 Score = 48.8 bits (111), Expect = 3e-05
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = +3

Query: 210 AVAKWLKANVPTKKTKFLNHHVEYFTGTKAVDALFDFK 323
           AVAK+L+ N PTK T  + H V+YF  +KAVD L D K
Sbjct: 23  AVAKYLRFNCPTKSTNMMGHRVDYFIASKAVDCLLDSK 60



 Score = 37.5 bits (83), Expect = 0.063
 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +1

Query: 313 LTSKWAT---GKNPAFTTRIEVTHYLHRMLLHKLFHRAKKV 426
           L SKWA    G+   FTTR  V  Y +R+L  + FHRA KV
Sbjct: 57  LDSKWAKAKKGEEALFTTRESVVDYCNRLLKKQFFHRALKV 97


>BC105971-1|AAI05972.1|  104|Homo sapiens TLOC1 protein protein.
          Length = 104

 Score = 37.5 bits (83), Expect = 0.063
 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +1

Query: 313 LTSKWAT---GKNPAFTTRIEVTHYLHRMLLHKLFHRAKKV 426
           L SKWA    G+   FTTR  V  Y +R+L  + FHRA KV
Sbjct: 19  LDSKWAKAKKGEEALFTTRESVVDYCNRLLKKQFFHRALKV 59


>AB065858-1|BAC06076.1|  335|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 335

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = -2

Query: 267 DLEILSSSLVHSL*AISRLRTLRSLASQTLEVLRSHLCVF*SFFYQPLYVKFAH 106
           D+ +++ S +H L A+ RL + +   S+ L    SH+CV   F+   L+  FA+
Sbjct: 229 DIMLITVSYIHILQAVFRLLS-QDARSKALSTCGSHICVILLFYVPALFSVFAY 281


>AB065800-1|BAC06019.1|  325|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 325

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = -2

Query: 267 DLEILSSSLVHSL*AISRLRTLRSLASQTLEVLRSHLCVF*SFFYQPLYVKFAHVSQNNK 88
           D+ +++ S VH L A+ RL T      ++L    SH+CV  +F+   L+    H    N 
Sbjct: 211 DITVIALSYVHILCAVFRLPT-HEARLKSLSTCGSHVCVILAFYTPALFSFMTHCFGRNV 269

Query: 87  TQF 79
            ++
Sbjct: 270 PRY 272


>DQ431494-1|ABE97223.1|  125|Homo sapiens anti-Rh(D) antibody
           immunoglobulin heavy chain variable region protein.
          Length = 125

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 645 DYDPKPWYYWVCGIW 689
           DYDPK +YY+  G+W
Sbjct: 103 DYDPKSFYYYAMGVW 117


>DQ431493-1|ABE97222.1|  123|Homo sapiens anti-Rh(D) antibody
           immunoglobulin heavy chain variable region protein.
          Length = 123

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 627 SRCLRLDYDPKPWYYWVCGIW 689
           +R L  DYDPK +YY+  G+W
Sbjct: 95  ARDLYGDYDPKSYYYYGMGVW 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,471,530
Number of Sequences: 237096
Number of extensions: 2064621
Number of successful extensions: 4014
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4014
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)