Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_G11
(895 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 34 0.18
12_01_0175 + 1304138-1304255,1304597-1304793,1304873-1304953,130... 32 0.54
06_03_0097 - 16607936-16608712,16610114-16610320,16611220-166113... 31 1.6
11_01_0174 + 1394229-1394346,1394695-1394891,1394972-1395052,139... 30 2.2
09_01_0019 + 403078-404211 30 2.9
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 30 2.9
11_06_0021 + 19314211-19314311,19315202-19315307,19317135-193174... 29 3.8
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 29 3.8
05_01_0538 + 4646772-4647059,4647462-4647542,4647819-4647890,464... 29 3.8
01_05_0808 - 25414486-25414677,25415114-25415290,25415839-254159... 29 5.0
02_01_0351 - 2535305-2535627,2535707-2535842,2535942-2535977,253... 29 6.6
07_03_1578 + 27872636-27872840,27872928-27873175,27873215-278732... 28 8.7
04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376 28 8.7
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 33.9 bits (74), Expect = 0.18
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 652 NSSKSDHHTDKNSSDEDSAPK-SRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLK 828
+ S ++ +S DED+APK + + S S + D EE+ D + + +E +
Sbjct: 206 DDSTDGSESESDSEDEDAAPKGAAKKESSSDEEDDSSEESSDDEPKQPQQKKAQEESSEE 265
Query: 829 LADSDPSERDRTHSRKSRKKS 891
++ D E D ++ +KK+
Sbjct: 266 SSEEDSDEEDEKLAKTPKKKT 286
>12_01_0175 +
1304138-1304255,1304597-1304793,1304873-1304953,
1305080-1305289,1305426-1305503,1305576-1305878
Length = 328
Score = 32.3 bits (70), Expect = 0.54
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = +1
Query: 661 KSDHHTDKNSSDEDSAPKSR--SRNSHSKVKSDLWEEN----PDIYGIRRSARPRKEPDR 822
+ D D N +ED P + SR VKS+L EEN P RRS R K +
Sbjct: 245 EDDGAEDVNEPEEDQVPSANQHSRTRRRGVKSELVEENERAGPSARMTRRSLRSSK-AEA 303
Query: 823 LKLADSDPSERDRTHSRKSRKK 888
++ A PS + S ++ K+
Sbjct: 304 VEAAQEVPSAAGPSQSTRASKR 325
>06_03_0097 - 16607936-16608712,16610114-16610320,16611220-16611336,
16611409-16611690,16611811-16612294,16612791-16612929,
16613138-16613243,16613396-16613562,16613632-16613707,
16614173-16614321,16614813-16614874,16615232-16615335,
16616856-16616950,16617046-16617136,16617785-16617922
Length = 997
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 682 KNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLADSDPS-ERD 858
K E A KSRSR+SH + +S + + R R + R SD S E
Sbjct: 859 KYEKQEHRAEKSRSRSSHRQTQSGSLDSDSTSDQHRSRERRSRHKIRSGTPGSDSSIEHH 918
Query: 859 RTHSRKSRKK 888
R+ RKS K
Sbjct: 919 RSKKRKSHSK 928
>11_01_0174 +
1394229-1394346,1394695-1394891,1394972-1395052,
1395184-1395393,1395531-1395608,1395682-1395990
Length = 330
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Frame = +1
Query: 679 DKNSSDEDSAPKSR--SRNSHSKVKSDLWEEN----PDIYGIRRSARPRKEPDRLKLADS 840
D N +ED P + SR VKS+L EEN P RR+ R K + ++ A
Sbjct: 253 DVNEPEEDQVPSANQHSRTRRRGVKSELVEENERAGPSARMTRRALRSSK-AEAVEAAQE 311
Query: 841 DPSERDRTHSRKSRKK 888
PS + S ++ K+
Sbjct: 312 VPSAAGPSQSTRASKR 327
>09_01_0019 + 403078-404211
Length = 377
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +1
Query: 661 KSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLADS 840
K +K +S S+ + RS++ S +SD ++ + + + R++ DS
Sbjct: 208 KHSRDEEKKTSRHRSSSRGRSKHRRSTKRSDTEDDLEEERSKDKKKKSRRKRHERSDEDS 267
Query: 841 DPSERDRTHSRKSRK 885
+ S+ D+ RKSRK
Sbjct: 268 E-SDSDKKRHRKSRK 281
>05_07_0116 -
27785083-27786123,27786201-27786278,27786364-27786976,
27787128-27787213,27787316-27787438,27787600-27787734,
27787930-27788019,27788796-27788981,27789560-27789661,
27789787-27789900,27790010-27790153,27790260-27790325,
27790895-27791056,27791668-27791916
Length = 1062
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/90 (17%), Positives = 44/90 (48%)
Frame = +2
Query: 467 KVIPQVKKEIKVTPANQALEAKVKVALVPQVQDHTDLHQKNLV*GVHIIVMIAKHHITMI 646
K + + + ++ A+Q E + ++A + + T++H NL+ + K+H +
Sbjct: 670 KKVQEREDALRAELASQLSEKEEEIARLNTKINQTEIHATNLISRLEATEAKLKNHESDS 729
Query: 647 MRIHQNLTIILIKIVLMKTQHQSLDLEIAI 736
+ + + + + + + +T+ QS + E+ I
Sbjct: 730 LALKEEIRSLTVSLESFRTEAQSREKEVKI 759
>11_06_0021 +
19314211-19314311,19315202-19315307,19317135-19317412,
19318587-19318692,19318812-19319159,19319237-19319313,
19319392-19319516,19319884-19320135,19320314-19320336
Length = 471
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 643 DNANSSKSDHHTDKNSSDEDSAPKSRSRNSHSKVK 747
D+ S +D H ++ SDED+ PK + VK
Sbjct: 232 DSDTSEINDSHCERGDSDEDARPKKKKAEKGKAVK 266
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = +1
Query: 625 KTSHNYDNANSS-KSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSAR 801
+ SH DN S + HH D S DS+P+ +++P G +
Sbjct: 308 RPSHYRDNTPSRGEMHHHRDNTPSRVDSSPRRSQHEDFRDRSPSRRDKSPSERGRTTESH 367
Query: 802 PRKEPDRLKLADSDPSERDRTHSRKSRKKST 894
+ R +++ E+ + H KS K+ST
Sbjct: 368 EAGKKSRGAKLENNSLEKAQ-HKSKSTKQST 397
>05_01_0538 +
4646772-4647059,4647462-4647542,4647819-4647890,
4648458-4649321
Length = 434
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/84 (26%), Positives = 34/84 (40%)
Frame = +1
Query: 631 SHNYDNANSSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRK 810
+H+ +SS S + D D + + RS + + D ++ R S +
Sbjct: 229 THDGHRKSSSPSRRSGSREVPDRDRSSRDRSSRDYDRSSHDRDRDHSSRDYDRPSHDRDR 288
Query: 811 EPDRLKLADSDPSERDRTHSRKSR 882
+ DR D D S RDR H R R
Sbjct: 289 DRDRSS-RDYDRSSRDRDHDRDIR 311
>01_05_0808 - 25414486-25414677,25415114-25415290,25415839-25415928,
25416016-25416081,25416170-25416240,25416375-25416450,
25416567-25420098,25421464-25421834
Length = 1524
Score = 29.1 bits (62), Expect = 5.0
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 712 KSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLADSDPSERDRTHSRKSRKKS 891
K R + +V L +E+ +IY + R KE R +L + ER+R R + +++
Sbjct: 1138 KKTLRETEKEVLHRL-DEDKEIYKMEREKEQAKERSRRELEEEKERERERAKDRLAVQRA 1196
Query: 892 T 894
T
Sbjct: 1197 T 1197
>02_01_0351 -
2535305-2535627,2535707-2535842,2535942-2535977,
2536057-2536173
Length = 203
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 784 IRRSARPRKEPDRLKLADSDPSERDRTHSRKSRKKST 894
+RRS R R P+RL L+ P R RK +KK T
Sbjct: 160 VRRSVRERYSPERLSLSGRRPPTGAR---RKGKKKET 193
>07_03_1578 +
27872636-27872840,27872928-27873175,27873215-27873295,
27873665-27873822,27874391-27874450,27874655-27874873,
27875100-27875201,27875352-27875500,27875582-27875734,
27875839-27876194
Length = 576
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +1
Query: 643 DNANSSKSDHHTDKNSSDEDSAPKSRSRNSHSK-VKSDLWEENPDIYGIRRSARPRKEPD 819
D K+D KN + A K K E +P+ ++ +EP
Sbjct: 456 DGGEKEKNDTSAKKNKKKKSKAEADGEEMDLDKPAKVAAEETDPENENKKKKKHKLEEPQ 515
Query: 820 RLKLADSDPSERDRTHSRKSRKK 888
++A + E+D T +K +KK
Sbjct: 516 DQEMAVNGNLEQDETPKKKKKKK 538
>04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376
Length = 1135
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +1
Query: 754 LWEENPDIYGIRRSARPRKEPDRLKLADSDPSERDRTHSRKSR 882
L +P++ G PR D + D+ PSE DR + R
Sbjct: 906 LSSSDPEVIGTEDECAPRAHLDEERPGDAAPSEEDRPRRKVQR 948
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,689,883
Number of Sequences: 37544
Number of extensions: 272676
Number of successful extensions: 843
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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