Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_G11
(895 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z70212-2|CAA94163.1| 430|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 33 0.36
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 33 0.36
AF016687-2|AAC48091.2| 280|Caenorhabditis elegans Hypothetical ... 32 0.64
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 31 0.84
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 1.5
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 30 1.9
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 30 2.6
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 30 2.6
AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical ... 30 2.6
AF036706-1|AAK39287.1| 196|Caenorhabditis elegans Hypothetical ... 30 2.6
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 29 3.4
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical pr... 29 3.4
U40954-4|AAB52655.3| 157|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 36.7 bits (81), Expect = 0.022
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = +1
Query: 658 SKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLAD 837
S S +SSDED + R SK + + +E P RR+ R++ DR + D
Sbjct: 506 SSSSSSMSSSSSDEDERRRKRREKESSKKRRSVEKERP-----RRADEHRRDRDRDRERD 560
Query: 838 SDPSERDRTHSRKSR 882
D S RD S +S+
Sbjct: 561 RDRSHRDVRSSGRSK 575
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Frame = +1
Query: 625 KTSHNYDNANSSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLW-EENPDIYGIRRSAR 801
K Y + S+ ++ DED ++ + K W E+ DI+ R+
Sbjct: 826 KKERKYQDDKDEDSNRKEPRSLDDEDKVELDKNFADKKEKKKGKWNEDEEDIFEDRKEEL 885
Query: 802 PRKEPDRL----KLADSDPSERDRTHSRKSRK 885
P KE DR + D + ++R H R S+K
Sbjct: 886 P-KESDRRDRKDRRHDDEDDRKERRHERDSQK 916
>Z70212-2|CAA94163.1| 430|Caenorhabditis elegans Hypothetical
protein R04D3.3 protein.
Length = 430
Score = 33.1 bits (72), Expect = 0.28
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +1
Query: 661 KSDHHTDKNSSDEDSAPKSRS----RNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLK 828
+S + D DED+ R R++H + D +E++ D Y S +PRK R +
Sbjct: 304 RSRNDDDDILDDEDNFKPRRKPYGGRSAHRNREEDDYEDDED-YEEDNSFKPRKTNRRSR 362
Query: 829 LADSDPSERDRT-HSRKSRKKS 891
+ D D S+ +T RK++K S
Sbjct: 363 IDDEDESKPRKTQRGRKNKKDS 384
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 32.7 bits (71), Expect = 0.36
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 628 TSHNYDNANSSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEEN--PDIYGIRRSAR 801
+S + D+ +SS S + +S E PK + + + + +EN G +R+ R
Sbjct: 709 SSDSSDSDDSSDSSSDSSSSSESEPEPPKKKKKKNSEESSKKKEKENIGRRDRGDKRAER 768
Query: 802 PR------KEPDRLKLADSDPSER-DRTHSRKSRKK 888
R K+ DR + DSD + R +R RK R K
Sbjct: 769 HRDQSVENKDKDRRRRQDSDENRRPERGDDRKDRSK 804
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 32.7 bits (71), Expect = 0.36
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 628 TSHNYDNANSSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEEN--PDIYGIRRSAR 801
+S + D+ +SS S + +S E PK + + + + +EN G +R+ R
Sbjct: 709 SSDSSDSDDSSDSSSDSSSSSESEPEPPKKKKKKNSEESSKKKEKENIGRRDRGDKRAER 768
Query: 802 PR------KEPDRLKLADSDPSER-DRTHSRKSRKK 888
R K+ DR + DSD + R +R RK R K
Sbjct: 769 HRDQSVENKDKDRRRRQDSDENRRPERGDDRKDRSK 804
>AF016687-2|AAC48091.2| 280|Caenorhabditis elegans Hypothetical
protein T21D12.3 protein.
Length = 280
Score = 31.9 bits (69), Expect = 0.64
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 679 DKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLADSDPSERD 858
D ++S+ED+A +R RN H+K S ++ G R R++P + DSD E
Sbjct: 146 DSHASEEDNA--ARRRNFHNKKTSRGGNDDKQSRGNNAEKRKRRDPMTSQGPDSDEDELQ 203
Query: 859 RTHSRKSRKKS 891
++ K++
Sbjct: 204 EMTNKDRLKRA 214
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 31.5 bits (68), Expect = 0.84
Identities = 19/81 (23%), Positives = 36/81 (44%)
Frame = +1
Query: 643 DNANSSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDR 822
D+ K D K+ +DE+ K + + K D +EN ++ + +K+ D+
Sbjct: 174 DDEEDKKKDKKKKKDDNDEEEKEKDKKKKDKKKDDDDDEDEND-----KKKDKKKKKDDK 228
Query: 823 LKLADSDPSERDRTHSRKSRK 885
D D +E D+ +K +K
Sbjct: 229 ----DDDENEDDKKKDKKKKK 245
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/82 (21%), Positives = 32/82 (39%)
Frame = +1
Query: 643 DNANSSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDR 822
+ + K + DK D+ K K D E+N D +K+ +
Sbjct: 132 EEEDKKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKD--EKNDD-----DDEEDKKKDKK 184
Query: 823 LKLADSDPSERDRTHSRKSRKK 888
K D+D E+++ +K +KK
Sbjct: 185 KKKDDNDEEEKEKDKKKKDKKK 206
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/82 (23%), Positives = 38/82 (46%)
Frame = +1
Query: 643 DNANSSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDR 822
D+ K DK +D+D K + + K K D +E+ D ++ + +K+ D+
Sbjct: 252 DDDEEEKDKKKKDKKKNDDDEEDKKKDK---KKKKDDDDDEDED---NKKKDKKKKKDDK 305
Query: 823 LKLADSDPSERDRTHSRKSRKK 888
D + E+++ +K +KK
Sbjct: 306 ----DDEDEEKEKDKKKKDKKK 323
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 712 KSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLADSDPSERDRTHSRKSRKKS 891
+SRSR+ D + RS +E +R + P ERDR+HS KSR +S
Sbjct: 109 RSRSRDRGRDRSRDRSRDRSRDRSRDRSRERSRERERTRSRSRSPQERDRSHS-KSRSRS 167
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Frame = +1
Query: 625 KTSHNYDNANSSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARP 804
K S N SS SD + S +D PK + + S K+ +E I I++ P
Sbjct: 162 KKSKKSKNKGSS-SDSSDSSDDSSDDEKPKKKKKKSKKPKKAPKSDEEVTIKIIKK---P 217
Query: 805 RKEPD-------RLKLADSDPSERDRTHSRKSRKKS 891
+K+P+ R+K + E+D+ +S ++
Sbjct: 218 KKKPEDLERRRHRVKKTEEHEEEKDKEEHHESNDEN 253
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 682 KNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLADSD 843
+ DED P +S+ +K+ S+ EE P + RRS ++E + A+SD
Sbjct: 786 EQEEDEDEIPIKKSKKRRAKIVSNDEEEEPVRHPKRRSDE-KREKRHVSYAESD 838
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 682 KNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLADSD 843
+ DED P +S+ +K+ S+ EE P + RRS ++E + A+SD
Sbjct: 786 EQEEDEDEIPIKKSKKRRAKIVSNDEEEEPVRHPKRRSDE-KREKRHVSYAESD 838
>AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical
protein F56A11.6 protein.
Length = 442
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +1
Query: 655 SSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLA 834
S K+ + + + D D + + + +S E G +S PRK +
Sbjct: 240 SKKTKLNFRRRTEDVDRSKDRSLKRREERSRSRQDRERDRSRGGEKSRSPRKSHQKSVDR 299
Query: 835 DSDPSERDRTHSRKSRK 885
D S++DR+ SRK R+
Sbjct: 300 DKTRSDKDRSRSRKDRE 316
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Frame = +1
Query: 679 DKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIR--RSARPRK-----EPDRLKLAD 837
DK SD+D + + R + +S E+ D R R R RK E +R +
Sbjct: 300 DKTRSDKDRSRSRKDREDRDRERSRKDREDRDRERSRKEREDRSRKDREDRERERSRKER 359
Query: 838 SDPSERDRTHSRKSRK 885
D S +DR SR+ R+
Sbjct: 360 EDRSRKDRERSRQDRE 375
>AF036706-1|AAK39287.1| 196|Caenorhabditis elegans Hypothetical
protein T07A9.1 protein.
Length = 196
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +1
Query: 679 DKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLADSDPSERD 858
D ++S+E++A +R RN H+K S ++ G R R++P + DSD E
Sbjct: 54 DSHASEENNA--ARRRNFHNKKTSRGGNDDKQSRGNNAEKRKRRDPMTSQGPDSDEDELQ 111
Query: 859 RTHSRKSRKKS 891
++ K++
Sbjct: 112 EMTNKDRLKRA 122
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 670 HHTDKNSS-DEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLADSDP 846
H+ + N +DS PKS S N+ + + + S+ P + P + DSDP
Sbjct: 780 HNAESNIFFPQDSVPKSISYNAGNLKNTSITTSKTSSAITNHSSLPPQPPSKPASRDSDP 839
Query: 847 SERDRTHSRKSRK 885
++ T S+ +K
Sbjct: 840 MKQLLTFSKSFKK 852
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 670 HHTDKNSS-DEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLADSDP 846
H+ + N +DS PKS S N+ + + + S+ P + P + DSDP
Sbjct: 780 HNAESNIFFPQDSVPKSISYNAGNLKNTSITTSKTSSAITNHSSLPPQPPSKPASRDSDP 839
Query: 847 SERDRTHSRKSRK 885
++ T S+ +K
Sbjct: 840 MKQLLTFSKSFKK 852
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 670 HHTDKNSS-DEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLADSDP 846
H+ + N +DS PKS S N+ + + + S+ P + P + DSDP
Sbjct: 780 HNAESNIFFPQDSVPKSISYNAGNLKNTSITTSKTSSAITNHSSLPPQPPSKPASRDSDP 839
Query: 847 SERDRTHSRKSRK 885
++ T S+ +K
Sbjct: 840 MKQLLTFSKSFKK 852
>Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical
protein ZC504.3 protein.
Length = 668
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +1
Query: 646 NANSSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARP--RKEPD 819
N++ +K + + DK + R R K D + +R R EPD
Sbjct: 32 NSHKTKEERYRDKEKERDHERHHDRERRDDRYRKVDSRDHRDRNRRSPAGSRTYCRDEPD 91
Query: 820 RLKLADSDPSERDRTHSRKSRKKST 894
R + SD + RDR+ R +S+
Sbjct: 92 RRRNNHSDRNRRDRSSERDRDNRSS 116
>U40954-4|AAB52655.3| 157|Caenorhabditis elegans Hypothetical
protein ZK813.3 protein.
Length = 157
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 655 SSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSD 753
+S+S+ + +SSD DS SRSR+ S +SD
Sbjct: 80 NSRSNSRSSSSSSDSDSDSDSRSRSRSSSSESD 112
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 634 HNYDNANSSKSDHHTDKNSSDEDSAPKSRSRNSHS 738
H+ ++ ++S+S + + SD DS +SRS +S S
Sbjct: 77 HHRNSRSNSRSSSSSSDSDSDSDSRSRSRSSSSES 111
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/78 (25%), Positives = 33/78 (42%)
Frame = +1
Query: 652 NSSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKL 831
+S S + +D D++P SRN H K + +P S P R K+
Sbjct: 113 DSDNSPPRPSRKRNDSDNSPPRPSRNRHDSDK----DNSPPRRRRHDSDNSPPRPSR-KI 167
Query: 832 ADSDPSERDRTHSRKSRK 885
+ PS R+R ++R+
Sbjct: 168 REESPSARNRRSPPRTRR 185
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +1
Query: 655 SSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLA 834
SS S+ D++ + + +SR+R+ + +E+P +RS R R + +
Sbjct: 210 SSSSNPKKDEHKRNRNRRSRSRTRSRERTSRRSRSKESP---RSKRSRRSRSSSNSSSES 266
Query: 835 DSDPSERDRTHSRKSRKKS 891
DS S R ++S +SR ++
Sbjct: 267 DSS-SSRSSSYSSRSRSRT 284
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/79 (25%), Positives = 39/79 (49%)
Frame = +1
Query: 655 SSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEPDRLKLA 834
SS S+ D++ + + +SR+R+ + +E+P +RS R R + +
Sbjct: 210 SSSSNPKKDEHKRNRNRRSRSRTRSRERTSRRSRSKESP---RSKRSRRSRSSSNSSSES 266
Query: 835 DSDPSERDRTHSRKSRKKS 891
DS S R ++S +SR ++
Sbjct: 267 DSS-SSRSSSYSSRSRSRT 284
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +1
Query: 637 NYDNANSSKSDHHTDKNSSDEDSAPKSRSRNSHSKVKSDLWEENPDIYGIRRSARPRKEP 816
+Y+ + ++ + D + +ED K N + K + E+PD I++ PR
Sbjct: 249 DYEPGENEENPTYEDIVALEEDE--KDLDSNRKYEHKFNFRFEDPDQEFIKQY--PRTVA 304
Query: 817 DRLKLADSDPSERDRTHSRKSRKK 888
+ ++ DS S +D+ H R+ RKK
Sbjct: 305 ESMRSEDS--SRKDKRHEREERKK 326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,804,738
Number of Sequences: 27780
Number of extensions: 290921
Number of successful extensions: 1178
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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