Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_G10
         (897 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66520-9|CAA91390.2|  335|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z66520-4|CAE48504.1|  174|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z69790-1|CAA93654.2|  427|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AL110487-6|CAB54433.2|  472|Caenorhabditis elegans Hypothetical ...    29   4.5  

>Z66520-9|CAA91390.2|  335|Caenorhabditis elegans Hypothetical
           protein F49E12.5a protein.
          Length = 335

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 761 IFVYNFKICILNITIFFVCHRARYFCIAA 675
           I  Y+ ++ ++   +F VCH+  YFC  A
Sbjct: 55  IIQYSTRVLLITTILFAVCHQIAYFCFKA 83


>Z66520-4|CAE48504.1|  174|Caenorhabditis elegans Hypothetical
           protein F49E12.5b protein.
          Length = 174

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 761 IFVYNFKICILNITIFFVCHRARYFCIAA 675
           I  Y+ ++ ++   +F VCH+  YFC  A
Sbjct: 70  IIQYSTRVLLITTILFAVCHQIAYFCFKA 98


>Z69790-1|CAA93654.2|  427|Caenorhabditis elegans Hypothetical
           protein F33C8.2 protein.
          Length = 427

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 606 HKEKRPVMSIENGVIKGIKTEIESSDTKVTCPMTHKEN 719
           H+ K  +  I N V  G K+ +++    +TCP+TH  N
Sbjct: 347 HERKMDMRRIMNTVHWGNKSSLKTKGVLITCPITHFYN 384


>AL110487-6|CAB54433.2|  472|Caenorhabditis elegans Hypothetical
           protein Y39E4B.7 protein.
          Length = 472

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -2

Query: 710 VCHRARYFCIAAFNLSLDTLDNTVFNRHDRPFFFVNCILYVALWLYI*WTCF 555
           VC+R    CI  F+     + N V  R+ R FFF  C L + + +Y+ + CF
Sbjct: 121 VCNR----CIETFDHHCPWVHNCVGKRNYRYFFFFLCSLSIHM-MYVFFLCF 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,573,996
Number of Sequences: 27780
Number of extensions: 358382
Number of successful extensions: 740
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)