Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_G07
(838 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118836-1|AAM50696.1| 276|Drosophila melanogaster GM06606p pro... 38 0.013
AY089675-1|AAL90413.1| 276|Drosophila melanogaster RH47057p pro... 38 0.013
AF258617-1|AAF71752.1| 276|Drosophila melanogaster replication-... 38 0.013
AF186594-3|AAG16723.1| 276|Drosophila melanogaster histone mRNA... 38 0.013
AE014297-4343|AAF56867.1| 276|Drosophila melanogaster CG11886-P... 38 0.013
AY118647-1|AAM50016.1| 1226|Drosophila melanogaster SD05267p pro... 31 1.5
AE014296-2615|AAF49551.3| 1226|Drosophila melanogaster CG5841-PA... 31 1.5
BT015177-1|AAT94406.1| 1462|Drosophila melanogaster SD19814p pro... 30 4.5
AY069180-1|AAL39325.1| 1263|Drosophila melanogaster GH22734p pro... 30 4.5
AY058401-1|AAL13630.1| 922|Drosophila melanogaster GH16858p pro... 30 4.5
AE013599-1186|AAF58740.2| 1462|Drosophila melanogaster CG30015-P... 30 4.5
AE013599-1185|AAF58741.2| 1462|Drosophila melanogaster CG30015-P... 30 4.5
AY051888-1|AAK93312.1| 503|Drosophila melanogaster LD37690p pro... 29 6.0
AE014297-4320|AAF56856.1| 503|Drosophila melanogaster CG11877-P... 29 6.0
AY075455-1|AAL68268.1| 602|Drosophila melanogaster RE13191p pro... 29 7.9
AE014296-2910|AAF49342.2| 581|Drosophila melanogaster CG32176-P... 29 7.9
>AY118836-1|AAM50696.1| 276|Drosophila melanogaster GM06606p
protein.
Length = 276
Score = 38.3 bits (85), Expect = 0.013
Identities = 30/101 (29%), Positives = 40/101 (39%)
Frame = +2
Query: 497 KSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQXXIDYGKNTVGVS 676
KS N R H E S + + E DP +L RRQ IDYGKNT
Sbjct: 159 KSGNFRAHKEEKRVRHNSYTSSTSSSSSYT------EADPAILSRRQKQIDYGKNTAAYE 212
Query: 677 KIMFTKFH*TKGLKELPKTPXXXLKX**GGHGDMLIKXWEK 799
+ + + ++ P+TP K D L+K W K
Sbjct: 213 RYV-EMVPKDERTRDHPRTPNKYGKYSRRAF-DGLVKIWRK 251
>AY089675-1|AAL90413.1| 276|Drosophila melanogaster RH47057p
protein.
Length = 276
Score = 38.3 bits (85), Expect = 0.013
Identities = 30/101 (29%), Positives = 40/101 (39%)
Frame = +2
Query: 497 KSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQXXIDYGKNTVGVS 676
KS N R H E S + + E DP +L RRQ IDYGKNT
Sbjct: 159 KSGNFRAHKEEKRVRHNSYTSSTSSSSSYT------EADPAILSRRQKQIDYGKNTAAYE 212
Query: 677 KIMFTKFH*TKGLKELPKTPXXXLKX**GGHGDMLIKXWEK 799
+ + + ++ P+TP K D L+K W K
Sbjct: 213 RYV-EMVPKDERTRDHPRTPNKYGKYSRRAF-DGLVKIWRK 251
>AF258617-1|AAF71752.1| 276|Drosophila melanogaster
replication-associated histonemRNA stem loop-binding
protein protein.
Length = 276
Score = 38.3 bits (85), Expect = 0.013
Identities = 30/101 (29%), Positives = 40/101 (39%)
Frame = +2
Query: 497 KSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQXXIDYGKNTVGVS 676
KS N R H E S + + E DP +L RRQ IDYGKNT
Sbjct: 159 KSGNFRAHKEEKRVRHNSYTSSTSSSSSYT------EADPAILSRRQKQIDYGKNTAAYE 212
Query: 677 KIMFTKFH*TKGLKELPKTPXXXLKX**GGHGDMLIKXWEK 799
+ + + ++ P+TP K D L+K W K
Sbjct: 213 RYV-EMVPKDERTRDHPRTPNKYGKYSRRAF-DGLVKIWRK 251
>AF186594-3|AAG16723.1| 276|Drosophila melanogaster histone mRNA
stem-loop bindingprotein protein.
Length = 276
Score = 38.3 bits (85), Expect = 0.013
Identities = 30/101 (29%), Positives = 40/101 (39%)
Frame = +2
Query: 497 KSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQXXIDYGKNTVGVS 676
KS N R H E S + + E DP +L RRQ IDYGKNT
Sbjct: 159 KSGNFRAHKEEKRVRHNSYTSSTSSSSSYT------EADPAILSRRQKQIDYGKNTAAYE 212
Query: 677 KIMFTKFH*TKGLKELPKTPXXXLKX**GGHGDMLIKXWEK 799
+ + + ++ P+TP K D L+K W K
Sbjct: 213 RYV-EMVPKDERTRDHPRTPNKYGKYSRRAF-DGLVKIWRK 251
>AE014297-4343|AAF56867.1| 276|Drosophila melanogaster CG11886-PA
protein.
Length = 276
Score = 38.3 bits (85), Expect = 0.013
Identities = 30/101 (29%), Positives = 40/101 (39%)
Frame = +2
Query: 497 KSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQXXIDYGKNTVGVS 676
KS N R H E S + + E DP +L RRQ IDYGKNT
Sbjct: 159 KSGNFRAHKEEKRVRHNSYTSSTSSSSSYT------EADPAILSRRQKQIDYGKNTAAYE 212
Query: 677 KIMFTKFH*TKGLKELPKTPXXXLKX**GGHGDMLIKXWEK 799
+ + + ++ P+TP K D L+K W K
Sbjct: 213 RYV-EMVPKDERTRDHPRTPNKYGKYSRRAF-DGLVKIWRK 251
>AY118647-1|AAM50016.1| 1226|Drosophila melanogaster SD05267p
protein.
Length = 1226
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 416 LCETMASCYKKRRLEHEESEDKITVTDKSMNSRTHSG 526
LC+T+ CY +R+ + E + T S +R SG
Sbjct: 877 LCKTLVKCYNERKTDDSELPGNVAGTSSSARARAASG 913
>AE014296-2615|AAF49551.3| 1226|Drosophila melanogaster CG5841-PA
protein.
Length = 1226
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 416 LCETMASCYKKRRLEHEESEDKITVTDKSMNSRTHSG 526
LC+T+ CY +R+ + E + T S +R SG
Sbjct: 877 LCKTLVKCYNERKTDDSELPGNVAGTSSSARARAASG 913
>BT015177-1|AAT94406.1| 1462|Drosophila melanogaster SD19814p
protein.
Length = 1462
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 470 SEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEG 577
+ D + V DKS ++ +H + R+ +K ++ NEG
Sbjct: 625 ARDAVQVPDKSRSATSHEQHIQETRQTIKREIHNEG 660
>AY069180-1|AAL39325.1| 1263|Drosophila melanogaster GH22734p
protein.
Length = 1263
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 470 SEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEG 577
+ D + V DKS ++ +H + R+ +K ++ NEG
Sbjct: 426 ARDAVQVPDKSRSATSHEQHIQETRQTIKREIHNEG 461
>AY058401-1|AAL13630.1| 922|Drosophila melanogaster GH16858p
protein.
Length = 922
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 470 SEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEG 577
+ D + V DKS ++ +H + R+ +K ++ NEG
Sbjct: 85 ARDAVQVPDKSRSATSHEQHIQETRQTIKREIHNEG 120
>AE013599-1186|AAF58740.2| 1462|Drosophila melanogaster CG30015-PB,
isoform B protein.
Length = 1462
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 470 SEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEG 577
+ D + V DKS ++ +H + R+ +K ++ NEG
Sbjct: 625 ARDAVQVPDKSRSATSHEQHIQETRQTIKREIHNEG 660
>AE013599-1185|AAF58741.2| 1462|Drosophila melanogaster CG30015-PA,
isoform A protein.
Length = 1462
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 470 SEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEG 577
+ D + V DKS ++ +H + R+ +K ++ NEG
Sbjct: 625 ARDAVQVPDKSRSATSHEQHIQETRQTIKREIHNEG 660
>AY051888-1|AAK93312.1| 503|Drosophila melanogaster LD37690p
protein.
Length = 503
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 472 RFFMFKSPFFITACHSFTELYLSFHLSVRLTLKLIRNSFVVKLIDEE 332
RF ++ +T T+L LSF+L+VRL K+ F KL++EE
Sbjct: 327 RFEAYRIVGALTYTAQLTQL-LSFYLNVRLPHKIAYGDFCRKLLNEE 372
>AE014297-4320|AAF56856.1| 503|Drosophila melanogaster CG11877-PA
protein.
Length = 503
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 472 RFFMFKSPFFITACHSFTELYLSFHLSVRLTLKLIRNSFVVKLIDEE 332
RF ++ +T T+L LSF+L+VRL K+ F KL++EE
Sbjct: 327 RFEAYRIVGALTYTAQLTQL-LSFYLNVRLPHKIAYGDFCRKLLNEE 372
>AY075455-1|AAL68268.1| 602|Drosophila melanogaster RE13191p
protein.
Length = 602
Score = 29.1 bits (62), Expect = 7.9
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 419 CETMASCYKKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGN 580
C T + +EH+E + I++ + S +S E K +KKL+S N GN
Sbjct: 120 CPTDTESSEDSDVEHKE--EHISLEEISSDSDIGGQESRKTKKKLRSKKTNNGN 171
>AE014296-2910|AAF49342.2| 581|Drosophila melanogaster CG32176-PA
protein.
Length = 581
Score = 29.1 bits (62), Expect = 7.9
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 419 CETMASCYKKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGN 580
C T + +EH+E + I++ + S +S E K +KKL+S N GN
Sbjct: 99 CPTDTESSEDSDVEHKE--EHISLEEISSDSDIGGQESRKTKKKLRSKKTNNGN 150
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,939,625
Number of Sequences: 53049
Number of extensions: 453383
Number of successful extensions: 1019
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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