Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_G07
(838 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to i... 29 4.1
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 29 4.1
Z68882-13|CAA93102.1| 296|Caenorhabditis elegans Hypothetical p... 29 5.4
U00040-5|AAA50666.1| 934|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z78198-11|CAH04700.1| 579|Caenorhabditis elegans Hypothetical p... 28 7.2
Z78198-10|CAB01568.1| 569|Caenorhabditis elegans Hypothetical p... 28 7.2
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 28 7.2
U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defecti... 28 7.2
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 28 7.2
AF083654-1|AAC32865.1| 569|Caenorhabditis elegans putative pota... 28 7.2
AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical... 28 7.2
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical... 28 7.2
Z98866-15|CAB11554.2| 335|Caenorhabditis elegans Hypothetical p... 28 9.5
Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical p... 28 9.5
Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical pr... 28 9.5
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 28 9.5
AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical ... 28 9.5
>U50066-1|AAA93437.2| 378|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 3 protein.
Length = 378
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 458 EHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPE 619
E EE E+++ KS +S G+ KNR K S+ E+EG + V + + E
Sbjct: 297 EIEEEEEEVKPVKKSKSSSQSVGK-RKNRPKSTSEEEDEGEEESRKVAEDAEEE 349
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/74 (24%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Frame = +2
Query: 443 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSD-----VENEGNLVVKLVEY- 604
KK++ + ++S++K + +D S +S S ++ +KK KS +++ + +K+++
Sbjct: 158 KKKKKKSKKSKNKGSSSDSSDSSDDSSDDEKPKKKKKKSKKPKKAPKSDEEVTIKIIKKP 217
Query: 605 ETDPEVLQRRQXXI 646
+ PE L+RR+ +
Sbjct: 218 KKKPEDLERRRHRV 231
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 443 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGN 580
KK++ + + S+D +D S +S S +D K +KK +N+G+
Sbjct: 129 KKKKSKKDSSDDSSDSSDSSDSS--DSSDDDKKKKKKSKKSKNKGS 172
>Z68882-13|CAA93102.1| 296|Caenorhabditis elegans Hypothetical
protein C47E12.10 protein.
Length = 296
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 437 CYKKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKS 559
C K++ E ESED+ D R K RKK+K+
Sbjct: 39 CGSKKKKEKSESEDETEDEDSENQRRRKKRAADKKRKKIKA 79
>U00040-5|AAA50666.1| 934|Caenorhabditis elegans Hypothetical
protein C18H2.4 protein.
Length = 934
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 448 FFITACHSFTELYLSFHLSVRLTLKLIRN 362
FF+T C + +++F ++RL+LKLIRN
Sbjct: 393 FFLT-CIAKVVTFMTFGFNIRLSLKLIRN 420
>Z78198-11|CAH04700.1| 579|Caenorhabditis elegans Hypothetical
protein F55C5.3b protein.
Length = 579
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +2
Query: 491 TDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQ 637
+DK+ +++ ++SK +KK K + + NL V+ + + DPEVL ++
Sbjct: 50 SDKTSDTKVVIEDESKKKKKKK---KKDKNLDVEELPQQEDPEVLAAKE 95
>Z78198-10|CAB01568.1| 569|Caenorhabditis elegans Hypothetical
protein F55C5.3a protein.
Length = 569
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +2
Query: 491 TDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQ 637
+DK+ +++ ++SK +KK K + + NL V+ + + DPEVL ++
Sbjct: 50 SDKTSDTKVVIEDESKKKKKKK---KKDKNLDVEELPQQEDPEVLAAKE 95
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +2
Query: 446 KRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVK-LVEYETD--P 616
K +++ + EDK + ++ R GE++ K +++++++ + + K LV+ D
Sbjct: 861 KVKVDAKTLEDKQKIVEELEKKRDELGEEAAKVKARQAEIQSKLDGIFKELVQCHRDEAK 920
Query: 617 EVLQRRQ-XXIDYGKNTVGVS 676
E LQ+RQ D K T +S
Sbjct: 921 ESLQKRQKLEKDIAKETANIS 941
>U80446-1|AAB37802.2| 1198|Caenorhabditis elegans Spindle defective
protein 5 protein.
Length = 1198
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 455 LEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENE 574
L+HEE+E K T+TD M D + +L + +E E
Sbjct: 822 LKHEENELKKTITDMGMRLNEAKKSDEFLKSELSTALEEE 861
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 443 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSD 562
KK+ + EE EDK K +S S E++K RK + +
Sbjct: 103 KKKNKDSEEEEDKKKDKKKKNDSSDESEEENKKRKNKRKN 142
>AF083654-1|AAC32865.1| 569|Caenorhabditis elegans putative
potassium channel subunitn2P24 protein.
Length = 569
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +2
Query: 491 TDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQ 637
+DK+ +++ ++SK +KK K + + NL V+ + + DPEVL ++
Sbjct: 50 SDKTSDTKVVIEDESKKKKKKK---KKDKNLDVEELPQQEDPEVLAAKE 95
>AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical
protein W02D3.10b protein.
Length = 946
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 443 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGN 580
KK + + +E E+KIT+ T + S KL EN+GN
Sbjct: 843 KKEKDKEKEKEEKITIDSSQSEILTSAKTLSSIMTKLIKPAENDGN 888
>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
protein W02D3.10a protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 443 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGN 580
KK + + +E E+KIT+ T + S KL EN+GN
Sbjct: 843 KKEKDKEKEKEEKITIDSSQSEILTSAKTLSSIMTKLIKPAENDGN 888
>Z98866-15|CAB11554.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.18 protein.
Length = 335
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 478 VLRFFMFKSPFFITACHSFTELYLSF 401
+L FF K PFF A H FT Y +F
Sbjct: 147 ILDFFTGKKPFFNDAGHIFTYFYDAF 172
>Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +2
Query: 467 ESEDKITVTDKSMNSRTHSGEDSKNRKKLK--SDVENEGNLVVKLVEYET--DPEVLQ 628
E ++ + +TD+++ +R E +KN +K+ + GN+++K +T EV+Q
Sbjct: 394 ELDEPLEITDQTVETRFFELETTKNLEKINRGTTTSEHGNILIKTTASQTPVSQEVVQ 451
>Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +2
Query: 467 ESEDKITVTDKSMNSRTHSGEDSKNRKKLK--SDVENEGNLVVKLVEYET--DPEVLQ 628
E ++ + +TD+++ +R E +KN +K+ + GN+++K +T EV+Q
Sbjct: 394 ELDEPLEITDQTVETRFFELETTKNLEKINRGTTTSEHGNILIKTTASQTPVSQEVVQ 451
>Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical
protein C33D9.9 protein.
Length = 310
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 461 HEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSD 562
H E+ K + D +M + +HS +K R+ + S+
Sbjct: 207 HSENRGKASSKDNAMETNSHSSSGTKKRRVISSE 240
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 458 EHEESEDKITVTDKSMNSRTHSGEDSKNR-KKLKSDVENEGNLVVKL-VEYETDPEVLQR 631
E E S+D+ + RT GED + + D + +G + K ++++DPE++++
Sbjct: 22 EGEASDDEEIAVKDDLKKRTPRGEDEADEDDEADEDEDEDGEDLGKYNFDFDSDPELVEK 81
>AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical
protein Y25C1A.8a protein.
Length = 345
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 458 EHEESEDKITVTDKSMNSRTHSGEDSKNR-KKLKSDVENEGNLVVKL-VEYETDPEVLQR 631
E E S+D+ + RT GED + + D + +G + K ++++DPE++++
Sbjct: 148 EGEASDDEEIAVKDDLKKRTPRGEDEADEDDEADEDEDEDGEDLGKYNFDFDSDPELVEK 207
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,611,909
Number of Sequences: 27780
Number of extensions: 262334
Number of successful extensions: 753
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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