Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_G03
         (900 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032425-1|AAH32425.1|  469|Homo sapiens ZC3H13 protein protein.       30   10.0 
AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein pr...    30   10.0 
AL831833-1|CAD38544.1|  796|Homo sapiens hypothetical protein pr...    30   10.0 
AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type c...    30   10.0 
AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c...    30   10.0 
AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type c...    30   10.0 
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c...    30   10.0 

>BC032425-1|AAH32425.1|  469|Homo sapiens ZC3H13 protein protein.
          Length = 469

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
 Frame = +2

Query: 209 RRAYEFQQR--QALRDDWNQVRDFE-QREQ--KPRRTNPAGQ 319
           +  Y+ + R  +  RD  ++ RDFE QRE+  KPR T+PAGQ
Sbjct: 28  KEKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQ 69


>AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein
           protein.
          Length = 1564

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
 Frame = +2

Query: 209 RRAYEFQQR--QALRDDWNQVRDFE-QREQ--KPRRTNPAGQ 319
           +  Y+ + R  +  RD  ++ RDFE QRE+  KPR T+PAGQ
Sbjct: 281 KEKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQ 322


>AL831833-1|CAD38544.1|  796|Homo sapiens hypothetical protein
           protein.
          Length = 796

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
 Frame = +2

Query: 209 RRAYEFQQR--QALRDDWNQVRDFE-QREQ--KPRRTNPAGQ 319
           +  Y+ + R  +  RD  ++ RDFE QRE+  KPR T+PAGQ
Sbjct: 106 KEKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQ 147


>AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type
           containing 13 protein.
          Length = 1564

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
 Frame = +2

Query: 209 RRAYEFQQR--QALRDDWNQVRDFE-QREQ--KPRRTNPAGQ 319
           +  Y+ + R  +  RD  ++ RDFE QRE+  KPR T+PAGQ
Sbjct: 281 KEKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQ 322


>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
           containing 13 protein.
          Length = 1668

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
 Frame = +2

Query: 209 RRAYEFQQR--QALRDDWNQVRDFE-QREQ--KPRRTNPAGQ 319
           +  Y+ + R  +  RD  ++ RDFE QRE+  KPR T+PAGQ
Sbjct: 281 KEKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQ 322


>AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type
           containing 13 protein.
          Length = 1564

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
 Frame = +2

Query: 209 RRAYEFQQR--QALRDDWNQVRDFE-QREQ--KPRRTNPAGQ 319
           +  Y+ + R  +  RD  ++ RDFE QRE+  KPR T+PAGQ
Sbjct: 281 KEKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQ 322


>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
           containing 13 protein.
          Length = 1668

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 5/42 (11%)
 Frame = +2

Query: 209 RRAYEFQQR--QALRDDWNQVRDFE-QREQ--KPRRTNPAGQ 319
           +  Y+ + R  +  RD  ++ RDFE QRE+  KPR T+PAGQ
Sbjct: 281 KEKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQ 322


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,783,346
Number of Sequences: 237096
Number of extensions: 1933037
Number of successful extensions: 4850
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4850
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)