Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_G03
         (900 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022666-1|AAY55082.1|  196|Drosophila melanogaster IP07107p pro...    30   3.8  
AE014297-371|AAG22211.3|  196|Drosophila melanogaster CG14675-PA...    30   3.8  
AF145671-1|AAD38646.1|  800|Drosophila melanogaster BcDNA.GH1197...    29   8.7  
AE014296-3529|AAF51717.1|  800|Drosophila melanogaster CG6014-PA...    29   8.7  

>BT022666-1|AAY55082.1|  196|Drosophila melanogaster IP07107p
           protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 194 GXRNDRRAYEFQQRQALRDDWNQVRDFEQR 283
           G   D   +   +R ALR  WN VR FE+R
Sbjct: 28  GPIKDEMGFTLSERLALRQAWNLVRPFERR 57


>AE014297-371|AAG22211.3|  196|Drosophila melanogaster CG14675-PA
           protein.
          Length = 196

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 194 GXRNDRRAYEFQQRQALRDDWNQVRDFEQR 283
           G   D   +   +R ALR  WN VR FE+R
Sbjct: 28  GPIKDEMGFTLSERLALRQAWNLVRPFERR 57


>AF145671-1|AAD38646.1|  800|Drosophila melanogaster BcDNA.GH11973
           protein.
          Length = 800

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 18/68 (26%), Positives = 30/68 (44%)
 Frame = +2

Query: 185 VTQGXRNDRRAYEFQQRQALRDDWNQVRDFEQREQKPRRTNPAGQRSGXXXXXXXXRIXR 364
           +TQ  R  +R  E ++R+ LR    Q    EQ+ ++ RR     QR          R+  
Sbjct: 320 MTQYDRKLQRQRERERRRQLRRQERQKLAREQKRERQRRLKEERQRLQREEQQRRQRLHH 379

Query: 365 SXPXPRIS 388
             P P+++
Sbjct: 380 DEPKPQVN 387


>AE014296-3529|AAF51717.1|  800|Drosophila melanogaster CG6014-PA
           protein.
          Length = 800

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 18/68 (26%), Positives = 30/68 (44%)
 Frame = +2

Query: 185 VTQGXRNDRRAYEFQQRQALRDDWNQVRDFEQREQKPRRTNPAGQRSGXXXXXXXXRIXR 364
           +TQ  R  +R  E ++R+ LR    Q    EQ+ ++ RR     QR          R+  
Sbjct: 320 MTQYDRKLQRQRERERRRQLRRQERQKLAREQKRERQRRLKEERQRLQREEQQRRQRLHH 379

Query: 365 SXPXPRIS 388
             P P+++
Sbjct: 380 DEPKPQVN 387


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,876,609
Number of Sequences: 53049
Number of extensions: 594685
Number of successful extensions: 1464
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)