Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_G02
         (814 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.           31   3.7  
AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15 pr...    31   5.0  
BC142728-1|AAI42729.1|  417|Homo sapiens SAMD14 protein protein.       31   6.5  
BC141822-1|AAI41823.1|  417|Homo sapiens SAMD14 protein protein.       31   6.5  
BC047081-1|AAH47081.1|  427|Homo sapiens SAMD14 protein protein.       31   6.5  
BC029872-1|AAH29872.1|  247|Homo sapiens SAMD14 protein protein.       31   6.5  

>AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.
          Length = 326

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +1

Query: 643 LVRSPVPTLPLTGYLSAFLPSGSVALSHS 729
           + R PV T+P+   L AF   GSV LSHS
Sbjct: 161 IFRGPVATIPIVLLLKAFPYCGSVVLSHS 189


>AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15
           protein.
          Length = 2789

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 579 SQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRIPVRLS 698
           SQ W +  G   Y   PP K+  A  C D   +  P+ +S
Sbjct: 123 SQSWAHNMGSEDYDCIPPNKVTMAGQCKDQGNFSFPISVS 162


>BC142728-1|AAI42729.1|  417|Homo sapiens SAMD14 protein protein.
          Length = 417

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 545 PPXRASQKSTLKSEVAKPDRTIKIPGVSPWKAPSCA 652
           P   ASQ+STL  +   P  + KIP   PW+   C+
Sbjct: 268 PKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCS 302


>BC141822-1|AAI41823.1|  417|Homo sapiens SAMD14 protein protein.
          Length = 417

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 545 PPXRASQKSTLKSEVAKPDRTIKIPGVSPWKAPSCA 652
           P   ASQ+STL  +   P  + KIP   PW+   C+
Sbjct: 268 PKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCS 302


>BC047081-1|AAH47081.1|  427|Homo sapiens SAMD14 protein protein.
          Length = 427

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 545 PPXRASQKSTLKSEVAKPDRTIKIPGVSPWKAPSCA 652
           P   ASQ+STL  +   P  + KIP   PW+   C+
Sbjct: 278 PKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCS 312


>BC029872-1|AAH29872.1|  247|Homo sapiens SAMD14 protein protein.
          Length = 247

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 545 PPXRASQKSTLKSEVAKPDRTIKIPGVSPWKAPSCA 652
           P   ASQ+STL  +   P  + KIP   PW+   C+
Sbjct: 98  PKKSASQESTLSDDSTPPSSSPKIPS-GPWQEAKCS 132


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,271,065
Number of Sequences: 237096
Number of extensions: 2489436
Number of successful extensions: 11624
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11617
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)