Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_F24
(954 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 36 0.043
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 35 0.099
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 35 0.099
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 34 0.13
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 34 0.13
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.30
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.30
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.30
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.53
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.53
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 32 0.70
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.92
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.92
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.92
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.92
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.6
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 30 2.1
Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical pr... 30 2.8
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 3.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 3.7
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 4.9
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 4.9
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 8.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 8.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 8.6
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 35.9 bits (79), Expect = 0.043
Identities = 30/97 (30%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Frame = +2
Query: 677 GGXRGFP-PXXGGXL--GVXPXKWGGXPXXKXXFGXXXPK-RXPXXXKRGXXWGGFXQ-R 841
G RG P P G G P + GG + P+ R P GG R
Sbjct: 1511 GPGRGMPSPMMRGSSMRGGFPQRGGGPGMGPSQYYHDSPQNRGPPMGGLPPPHGGMNGWR 1570
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPPGN 952
G PPP + P G PPP + P G PP N
Sbjct: 1571 GGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPN 1607
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXV 919
G PPP PP GG PPP V
Sbjct: 1590 GGPPPRLGMPPPGPPPPNGGPPPPSV 1615
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 34.7 bits (76), Expect = 0.099
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKP-XGXPPGN 952
G PPP P GGGG PP + +P G PP N
Sbjct: 788 GAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPN 825
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 839 RGXPPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPPG 949
R P P + PP GG G PPP + P G P G
Sbjct: 768 RPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 34.7 bits (76), Expect = 0.099
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKP-XGXPPGN 952
G PPP P GGGG PP + +P G PP N
Sbjct: 788 GAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPN 825
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 839 RGXPPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPPG 949
R P P + PP GG G PPP + P G P G
Sbjct: 768 RPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 839 RGXPPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPPG 949
R P P + PP GG G PPP + P G P G
Sbjct: 768 RPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 839 RGXPPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPPG 949
R P P + PP GG G PPP + P G P G
Sbjct: 768 RPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGG 804
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -2
Query: 851 GGXPFXKNPPXXXPFXGXXGPFLGXXXQKXFFXXGFPPIXWGXPLXPPXGXXEXPXPPPP 672
G P PP P G P G G PPI G P PP P PPPP
Sbjct: 718 GLPPITGGPPPPPP-PGGLPPITGGPPPPPP-PGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 671 XXXG 660
G
Sbjct: 776 PPGG 779
Score = 31.5 bits (68), Expect = 0.92
Identities = 26/80 (32%), Positives = 26/80 (32%)
Frame = -2
Query: 911 GGXXPPPQXGGXFFFXFXRGGGXPFXKNPPXXXPFXGXXGPFLGXXXQKXFFXXGFPPIX 732
GG PPP GG P PP P G P G G PP
Sbjct: 724 GGPPPPPPPGGL----------PPITGGPPPPPP-PGGLPPISGGPPPPPPPPGGCPP-- 770
Query: 731 WGXPLXPPXGXXEXPXPPPP 672
P PP G P PPPP
Sbjct: 771 -PPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -2
Query: 851 GGXPFXKNPPXXXPFXGXXGPFLGXXXQKXFFXXGFPPIXWGXPLXPPXGXXEXPXPPPP 672
G P PP P G P G G PPI G P PP P PPPP
Sbjct: 718 GLPPITGGPPPPPP-PGGLPPITGGPPPPPP-PGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 671 XXXG 660
G
Sbjct: 776 PPGG 779
Score = 31.5 bits (68), Expect = 0.92
Identities = 26/80 (32%), Positives = 26/80 (32%)
Frame = -2
Query: 911 GGXXPPPQXGGXFFFXFXRGGGXPFXKNPPXXXPFXGXXGPFLGXXXQKXFFXXGFPPIX 732
GG PPP GG P PP P G P G G PP
Sbjct: 724 GGPPPPPPPGGL----------PPITGGPPPPPP-PGGLPPISGGPPPPPPPPGGCPP-- 770
Query: 731 WGXPLXPPXGXXEXPXPPPP 672
P PP G P PPPP
Sbjct: 771 -PPPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -2
Query: 851 GGXPFXKNPPXXXPFXGXXGPFLGXXXQKXFFXXGFPPIXWGXPLXPPXGXXEXPXPPPP 672
G P PP P G P G G PPI G P PP P PPPP
Sbjct: 301 GLPPITGGPPPPPP-PGGLPPITGGPPPPPP-PGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 671 XXXG 660
G
Sbjct: 359 PPGG 362
Score = 31.5 bits (68), Expect = 0.92
Identities = 26/80 (32%), Positives = 26/80 (32%)
Frame = -2
Query: 911 GGXXPPPQXGGXFFFXFXRGGGXPFXKNPPXXXPFXGXXGPFLGXXXQKXFFXXGFPPIX 732
GG PPP GG P PP P G P G G PP
Sbjct: 307 GGPPPPPPPGGL----------PPITGGPPPPPP-PGGLPPISGGPPPPPPPPGGCPP-- 353
Query: 731 WGXPLXPPXGXXEXPXPPPP 672
P PP G P PPPP
Sbjct: 354 -PPPPPPPGGFKGGPPPPPP 372
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPP 946
G PPP + P GG PPP + P G PP
Sbjct: 315 GMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 349
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPP 946
G PPP + P GG PPP + P G PP
Sbjct: 325 GMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 359
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 31.9 bits (69), Expect = 0.70
Identities = 30/98 (30%), Positives = 31/98 (31%), Gaps = 7/98 (7%)
Frame = +2
Query: 677 GGXRG-FPPXXGGXLGVXPXKWG--GXPXXKXXFGXXXPKRXPXXXKRGXXWGGFXQRGX 847
GG G F P G P +G G P G P P G G F G
Sbjct: 164 GGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPS---GGPTGPFDPSGA 220
Query: 848 PP----PXKXXKKXXPPXGGGGXPPPXVXKKPXGXPPG 949
PP P PP GG P P G PPG
Sbjct: 221 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPG 258
Score = 30.3 bits (65), Expect = 2.1
Identities = 29/91 (31%), Positives = 30/91 (32%), Gaps = 4/91 (4%)
Frame = +2
Query: 689 GFPPXXGGXLGVXPXKWGGXPXXKXXFGXXXPKRXPXXXKRGXXWGGFXQRGXPP----P 856
G PP GG G P G P G P P G G F G PP P
Sbjct: 234 GAPPS-GGPPG--PFDPSGAPPSGGPPGPFNPSGAPPS---GGPPGPFDPSGAPPSGGPP 287
Query: 857 XKXXKKXXPPXGGGGXPPPXVXKKPXGXPPG 949
PP GG P +P G PPG
Sbjct: 288 GPFDPSGAPPSGGPPGPFDPSGAQPSGGPPG 318
Score = 29.9 bits (64), Expect = 2.8
Identities = 29/91 (31%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Frame = +2
Query: 689 GFPPXXGGXLGVXPXKWGGXPXXKXXFGXXXPKRXPXXXKRGXXWGGFXQRGXPP----P 856
G PP GG G P G P G P P G G F G PP P
Sbjct: 414 GAPPS-GGPPG--PFNPSGAPPSGGPPGPFNPSGAPPS---GGPPGPFNPSGAPPSGGPP 467
Query: 857 XKXXKKXXPPXGGGGXPPPXVXKKPXGXPPG 949
PP GG P P G PPG
Sbjct: 468 GPFNPSGAPPSGGPPGPFDPSGAPPSGGPPG 498
Score = 29.5 bits (63), Expect = 3.7
Identities = 29/91 (31%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Frame = +2
Query: 689 GFPPXXGGXLGVXPXKWGGXPXXKXXFGXXXPKRXPXXXKRGXXWGGFXQRGXPP----P 856
G PP GG G P G P G P P G G F G PP P
Sbjct: 144 GAPPS-GGPPG--PFDPSGAPPSGGPPGLFDPSGAPPS---GGPPGPFGPSGAPPSGGPP 197
Query: 857 XKXXKKXXPPXGGGGXPPPXVXKKPXGXPPG 949
PP GG P P G PPG
Sbjct: 198 GPFNPSEAPPSGGPTGPFDPSGAPPSGGPPG 228
Score = 29.5 bits (63), Expect = 3.7
Identities = 29/91 (31%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Frame = +2
Query: 689 GFPPXXGGXLGVXPXKWGGXPXXKXXFGXXXPKRXPXXXKRGXXWGGFXQRGXPP----P 856
G PP GG G P G P G P P G G F G PP P
Sbjct: 324 GAPPS-GGPPG--PFDPSGAPPSGGPPGPFNPSGAPPS---GGPPGPFDPSGAPPSGGPP 377
Query: 857 XKXXKKXXPPXGGGGXPPPXVXKKPXGXPPG 949
PP GG P P G PPG
Sbjct: 378 GPFDPSGAPPSGGPPGPFDPSGAPPSGGPPG 408
Score = 29.5 bits (63), Expect = 3.7
Identities = 29/91 (31%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Frame = +2
Query: 689 GFPPXXGGXLGVXPXKWGGXPXXKXXFGXXXPKRXPXXXKRGXXWGGFXQRGXPP----P 856
G PP GG G P G P G P P G G F G PP P
Sbjct: 339 GAPPS-GGPPG--PFNPSGAPPSGGPPGPFDPSGAPPS---GGPPGPFDPSGAPPSGGPP 392
Query: 857 XKXXKKXXPPXGGGGXPPPXVXKKPXGXPPG 949
PP GG P P G PPG
Sbjct: 393 GPFDPSGAPPSGGPPGPFNPSGAPPSGGPPG 423
Score = 29.5 bits (63), Expect = 3.7
Identities = 29/91 (31%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Frame = +2
Query: 689 GFPPXXGGXLGVXPXKWGGXPXXKXXFGXXXPKRXPXXXKRGXXWGGFXQRGXPP----P 856
G PP GG G P G P G P P G G F G PP P
Sbjct: 429 GAPPS-GGPPG--PFNPSGAPPSGGPPGPFNPSGAPPS---GGPPGPFNPSGAPPSGGPP 482
Query: 857 XKXXKKXXPPXGGGGXPPPXVXKKPXGXPPG 949
PP GG P P G PPG
Sbjct: 483 GPFDPSGAPPSGGPPGPFNPSGAPPSGGPPG 513
Score = 29.1 bits (62), Expect = 4.9
Identities = 29/91 (31%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Frame = +2
Query: 689 GFPPXXGGXLGVXPXKWGGXPXXKXXFGXXXPKRXPXXXKRGXXWGGFXQRGXPP----P 856
G PP GG G P G P G P P G G F G PP P
Sbjct: 354 GAPPS-GGPPG--PFDPSGAPPSGGPPGPFDPSGAPPS---GGPPGPFDPSGAPPSGGPP 407
Query: 857 XKXXKKXXPPXGGGGXPPPXVXKKPXGXPPG 949
PP GG P P G PPG
Sbjct: 408 GPFNPSGAPPSGGPPGPFNPSGAPPSGGPPG 438
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.92
Identities = 26/89 (29%), Positives = 28/89 (31%), Gaps = 6/89 (6%)
Frame = +2
Query: 695 PPXXG--GXLGVXPXKWGGX--PXXKXXFGXXXPKRXPXXXKRGXXWGGFXQRGXPPPXK 862
PP G G P +G P +G P G GG G PPP
Sbjct: 381 PPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGG 440
Query: 863 XXKKXXPPXG--GGGXPPPXVXKKPXGXP 943
PP G G PPP P G P
Sbjct: 441 PGAYGPPPTGFPPVGAPPPGAAGAPGGNP 469
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/79 (26%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
Frame = +2
Query: 728 PXKWGGXPXX--KXXFGXXXPKRXPXXXKRGXXWGGFXQRGXPPPXKXXKKXXPPXGGGG 901
P ++GG P +G P + G Q+G P + + PP G G
Sbjct: 290 PQQFGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQGSFG 349
Query: 902 XPPPXVXKKP----XGXPP 946
PPP P G PP
Sbjct: 350 APPPQQFHAPSPQSFGGPP 368
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPP 946
G PPP PP GG PPP P PP
Sbjct: 270 GSPPPPPTGSPPPPP-AGGSPPPPRAGSPPPPPPP 303
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 4/39 (10%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKP----XGXPP 946
G PPP K P G G PPP P G PP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP 273
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPP 946
G PPP PP G PPP P G PP
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPP----PPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPP 946
G PPP PP GG PPP P PP
Sbjct: 291 GSPPPPPTGSPPPPP-AGGSPPPPRAGSPPPPPPP 324
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 4/39 (10%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKP----XGXPP 946
G PPP K P G G PPP P G PP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP 294
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPP 946
G PPP PP G PPP P G PP
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPP----PPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.92
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPP 946
G PPP PP GG PPP P PP
Sbjct: 276 GSPPPPPTGSPPPPP-AGGSPPPPRAGSPPPPPPP 309
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 4/39 (10%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKP----XGXPP 946
G PPP K P G G PPP P G PP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP 279
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 842 GXPPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPP 946
G PPP PP G PPP P G PP
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPP----PPRGSPP 314
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 744 PPHFXGXTPKXPPWXGGXPLXPP 676
PP F G P PP GG P PP
Sbjct: 87 PPMFAGGIPPPPPMMGGIPPPPP 109
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Frame = -1
Query: 783 GXXXPKXFFXXGXPPH--FXGXTPKXPPWXGGXPLXPPXXXXG 661
G P F G PP G P PP G P PP G
Sbjct: 82 GIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +2
Query: 824 GGFXQRGXPPPXKXXKKXXPPXGGGGXPPPXVXKKP---XGXPPG 949
GG G PPP P GGG PPP P G P G
Sbjct: 26 GGGCGCGAPPPPPACAPPPAPACGGGAPPPPAYAAPAPSYGAPAG 70
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 812 GXXWGGFXQRGXPPPXKXXKKXXPPXGGGGXPPP 913
G GG PPP P GGG PPP
Sbjct: 23 GGGGGGCGCGAPPPPPACAPPPAPACGGGAPPPP 56
>Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -1
Query: 951 FPGGXPXGFXKTXG--GGXPPPPXGG 880
FPGG P GF G GG P P GG
Sbjct: 286 FPGGMPGGFPGAGGMPGGFPGAPGGG 311
>Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -1
Query: 951 FPGGXPXGFXKTXG--GGXPPPPXGG 880
FPGG P GF G GG P P GG
Sbjct: 286 FPGGMPGGFPGAGGMPGGFPGAPGGG 311
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 848 PPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPPGN 952
PPP P GG PPP + P PPGN
Sbjct: 772 PPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPGN 806
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +2
Query: 848 PPPXKXXKKXXPPXGGGGXPPPXVXKKPXGXPPGN 952
PPP P GG PPP + P PPGN
Sbjct: 772 PPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPGN 806
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 881 PPXGGGGXPPPXVXKKPXGXPP 946
PP GG G PPP ++ G PP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPP 694
Score = 28.7 bits (61), Expect = 6.5
Identities = 24/89 (26%), Positives = 31/89 (34%), Gaps = 4/89 (4%)
Frame = -2
Query: 926 FXKPXGGXXPPPQXGGXFFFXFXRGGGXPFXK---NPPXXXPFXGXXGPFLGXXXQKXFF 756
+ P GG PPP G ++ G P+ PP P+ G +
Sbjct: 671 YGPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQR 730
Query: 755 XXGFPPIXW-GXPLXPPXGXXEXPXPPPP 672
G+PP G P P G PPPP
Sbjct: 731 GYGYPPPPQPGHPYQQPYG----QMPPPP 755
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 881 PPXGGGGXPPPXVXKKPXGXPP 946
PP GG G PPP ++ G PP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPP 694
Score = 28.7 bits (61), Expect = 6.5
Identities = 24/89 (26%), Positives = 31/89 (34%), Gaps = 4/89 (4%)
Frame = -2
Query: 926 FXKPXGGXXPPPQXGGXFFFXFXRGGGXPFXK---NPPXXXPFXGXXGPFLGXXXQKXFF 756
+ P GG PPP G ++ G P+ PP P+ G +
Sbjct: 671 YGPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQR 730
Query: 755 XXGFPPIXW-GXPLXPPXGXXEXPXPPPP 672
G+PP G P P G PPPP
Sbjct: 731 GYGYPPPPQPGHPYQQPYG----QMPPPP 755
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/51 (29%), Positives = 18/51 (35%)
Frame = -2
Query: 827 PPXXXPFXGXXGPFLGXXXQKXFFXXGFPPIXWGXPLXPPXGXXEXPXPPP 675
PP P PF+G + +PP P PP P PPP
Sbjct: 60 PPSTMPPGPHGMPFMGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPP 110
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = -1
Query: 450 PKXGFFXPXXXGGXPXXPXXFFFXGXPXP--PP 358
P GFF P G P P F G P P PP
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPP 323
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = -1
Query: 450 PKXGFFXPXXXGGXPXXPXXFFFXGXPXP--PP 358
P GFF P G P P F G P P PP
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPP 323
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,079,412
Number of Sequences: 27780
Number of extensions: 224357
Number of successful extensions: 983
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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