Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_F22
(877 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00001-1|AAA60471.1| 823|Homo sapiens CDC27 protein. 170 7e-42
S78234-1|AAB34378.1| 824|Homo sapiens H-NUC protein. 170 7e-42
BC011656-1|AAH11656.1| 830|Homo sapiens CDC27 protein protein. 170 7e-42
AY518321-1|AAR89911.1| 824|Homo sapiens cell division cycle 27 ... 170 7e-42
BC042083-1|AAH42083.1| 774|Homo sapiens transmembrane and tetra... 38 0.063
BC028716-1|AAH28716.1| 227|Homo sapiens TMTC1 protein protein. 38 0.063
AK055962-1|BAB71057.1| 645|Homo sapiens UBUNIT (EC 2.4.1.-). p... 38 0.063
U18291-1|AAC50200.1| 619|Homo sapiens CDC16Hs protein. 35 0.44
AY599074-1|AAS94323.1| 619|Homo sapiens CDC16 cell division cyc... 35 0.44
AL160396-2|CAM22287.1| 619|Homo sapiens cell division cycle 16 ... 35 0.44
AF164598-1|AAD45156.1| 568|Homo sapiens cell division control p... 35 0.44
BC008782-1|AAH08782.1| 1219|Homo sapiens nuclear factor of kappa... 30 9.6
AJ249601-1|CAB63467.1| 559|Homo sapiens IkappaBR protein. 30 9.6
>U00001-1|AAA60471.1| 823|Homo sapiens CDC27 protein.
Length = 823
Score = 170 bits (413), Expect = 7e-42
Identities = 79/170 (46%), Positives = 108/170 (63%), Gaps = 7/170 (4%)
Frame = +3
Query: 138 IVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSGRINEAHHLLQ 317
++QEP+Q +W LN+Y + +A+FLAERLYAEV SEEA FLL TCYYRSG+ +A+ LL+
Sbjct: 3 VLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRLLK 62
Query: 318 NKTLALPQARFLLAKCSADLKSYKDAEIALGSNL-------DIIASEFGEQAPYALQLLA 476
+ PQ ++LLAKC DL + E L + D I +EFG+ A + L LL
Sbjct: 63 GHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFGDSACFTLSLLG 122
Query: 477 KVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQINN 626
VY T R + +E ++K+LSLNPF+W F LC +GEK DP Q F+ +
Sbjct: 123 HVYCKTDRLAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKFTS 172
>S78234-1|AAB34378.1| 824|Homo sapiens H-NUC protein.
Length = 824
Score = 170 bits (413), Expect = 7e-42
Identities = 79/170 (46%), Positives = 108/170 (63%), Gaps = 7/170 (4%)
Frame = +3
Query: 138 IVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSGRINEAHHLLQ 317
++QEP+Q +W LN+Y + +A+FLAERLYAEV SEEA FLL TCYYRSG+ +A+ LL+
Sbjct: 3 VLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRLLK 62
Query: 318 NKTLALPQARFLLAKCSADLKSYKDAEIALGSNL-------DIIASEFGEQAPYALQLLA 476
+ PQ ++LLAKC DL + E L + D I +EFG+ A + L LL
Sbjct: 63 GHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFGDSACFTLSLLG 122
Query: 477 KVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQINN 626
VY T R + +E ++K+LSLNPF+W F LC +GEK DP Q F+ +
Sbjct: 123 HVYCKTDRLAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKFTS 172
>BC011656-1|AAH11656.1| 830|Homo sapiens CDC27 protein protein.
Length = 830
Score = 170 bits (413), Expect = 7e-42
Identities = 79/170 (46%), Positives = 108/170 (63%), Gaps = 7/170 (4%)
Frame = +3
Query: 138 IVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSGRINEAHHLLQ 317
++QEP+Q +W LN+Y + +A+FLAERLYAEV SEEA FLL TCYYRSG+ +A+ LL+
Sbjct: 3 VLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRLLK 62
Query: 318 NKTLALPQARFLLAKCSADLKSYKDAEIALGSNL-------DIIASEFGEQAPYALQLLA 476
+ PQ ++LLAKC DL + E L + D I +EFG+ A + L LL
Sbjct: 63 GHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFGDSACFTLSLLG 122
Query: 477 KVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQINN 626
VY T R + +E ++K+LSLNPF+W F LC +GEK DP Q F+ +
Sbjct: 123 HVYCKTDRLAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKFTS 172
>AY518321-1|AAR89911.1| 824|Homo sapiens cell division cycle 27
protein.
Length = 824
Score = 170 bits (413), Expect = 7e-42
Identities = 79/170 (46%), Positives = 108/170 (63%), Gaps = 7/170 (4%)
Frame = +3
Query: 138 IVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSGRINEAHHLLQ 317
++QEP+Q +W LN+Y + +A+FLAERLYAEV SEEA FLL TCYYRSG+ +A+ LL+
Sbjct: 3 VLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRLLK 62
Query: 318 NKTLALPQARFLLAKCSADLKSYKDAEIALGSNL-------DIIASEFGEQAPYALQLLA 476
+ PQ ++LLAKC DL + E L + D I +EFG+ A + L LL
Sbjct: 63 GHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFGDSACFTLSLLG 122
Query: 477 KVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQINN 626
VY T R + +E ++K+LSLNPF+W F LC +GEK DP Q F+ +
Sbjct: 123 HVYCKTDRLAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKFTS 172
>BC042083-1|AAH42083.1| 774|Homo sapiens transmembrane and
tetratricopeptide repeat containing 1 protein.
Length = 774
Score = 37.5 bits (83), Expect = 0.063
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +3
Query: 261 LGTCYYRSGRINEAHHLLQNKTLALP---QARFLLAKCSADLKSYKDAEIALGSNLDIIA 431
LG YY +GR EA + Q P + R LA+ A + K+AE I++
Sbjct: 581 LGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTN---HIVS 637
Query: 432 SEFGEQAPYALQLLAKVYISTGRRNEAAEAHRKALSLNP 548
E G Y +LL+ +Y ++A +A KAL L P
Sbjct: 638 EETGCLECY--RLLSAIYSKQENHDKALDAIDKALQLKP 674
>BC028716-1|AAH28716.1| 227|Homo sapiens TMTC1 protein protein.
Length = 227
Score = 37.5 bits (83), Expect = 0.063
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +3
Query: 261 LGTCYYRSGRINEAHHLLQNKTLALP---QARFLLAKCSADLKSYKDAEIALGSNLDIIA 431
LG YY +GR EA + Q P + R LA+ A + K+AE I++
Sbjct: 34 LGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTN---HIVS 90
Query: 432 SEFGEQAPYALQLLAKVYISTGRRNEAAEAHRKALSLNP 548
E G Y +LL+ +Y ++A +A KAL L P
Sbjct: 91 EETGCLECY--RLLSAIYSKQENHDKALDAIDKALQLKP 127
>AK055962-1|BAB71057.1| 645|Homo sapiens UBUNIT (EC 2.4.1.-).
protein.
Length = 645
Score = 37.5 bits (83), Expect = 0.063
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +3
Query: 261 LGTCYYRSGRINEAHHLLQNKTLALP---QARFLLAKCSADLKSYKDAEIALGSNLDIIA 431
LG YY +GR EA + Q P + R LA+ A + K+AE I++
Sbjct: 452 LGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTN---HIVS 508
Query: 432 SEFGEQAPYALQLLAKVYISTGRRNEAAEAHRKALSLNP 548
E G Y +LL+ +Y ++A +A KAL L P
Sbjct: 509 EETGCLECY--RLLSAIYSKQENHDKALDAIDKALQLKP 545
>U18291-1|AAC50200.1| 619|Homo sapiens CDC16Hs protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.44
Identities = 19/75 (25%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 177 LNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSGRINEAHHLLQNKTL-ALPQA-RF 350
L+ ++++A+F A+++ + + + L C Y + + + A H L+++ L L +A R+
Sbjct: 14 LDQQQYQSALFWADKVASLSREPQDIYWLAQCLYLTAQYHRAAHALRSRKLDKLYEACRY 73
Query: 351 LLAKCSADLKSYKDA 395
L A+C K ++ A
Sbjct: 74 LAARCHYAAKEHQQA 88
>AY599074-1|AAS94323.1| 619|Homo sapiens CDC16 cell division cycle
16 homolog (S. cerevisiae) protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.44
Identities = 19/75 (25%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 177 LNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSGRINEAHHLLQNKTL-ALPQA-RF 350
L+ ++++A+F A+++ + + + L C Y + + + A H L+++ L L +A R+
Sbjct: 14 LDQQQYQSALFWADKVASLSREPQDIYWLAQCLYLTAQYHRAAHALRSRKLDKLYEACRY 73
Query: 351 LLAKCSADLKSYKDA 395
L A+C K ++ A
Sbjct: 74 LAARCHYAAKEHQQA 88
>AL160396-2|CAM22287.1| 619|Homo sapiens cell division cycle 16
homolog (S. cerevisiae) protein.
Length = 619
Score = 34.7 bits (76), Expect = 0.44
Identities = 19/75 (25%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 177 LNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSGRINEAHHLLQNKTL-ALPQA-RF 350
L+ ++++A+F A+++ + + + L C Y + + + A H L+++ L L +A R+
Sbjct: 14 LDQQQYQSALFWADKVASLSREPQDIYWLAQCLYLTAQYHRAAHALRSRKLDKLYEACRY 73
Query: 351 LLAKCSADLKSYKDA 395
L A+C K ++ A
Sbjct: 74 LAARCHYAAKEHQQA 88
>AF164598-1|AAD45156.1| 568|Homo sapiens cell division control
protein 16 protein.
Length = 568
Score = 34.7 bits (76), Expect = 0.44
Identities = 19/75 (25%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +3
Query: 177 LNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSGRINEAHHLLQNKTL-ALPQA-RF 350
L+ ++++A+F A+++ + + + L C Y + + + A H L+++ L L +A R+
Sbjct: 14 LDQQQYQSALFWADKVASLSREPQDIYWLAQCLYLTAQYHRAAHALRSRKLDKLYEACRY 73
Query: 351 LLAKCSADLKSYKDA 395
L A+C K ++ A
Sbjct: 74 LAARCHYAAKEHQQA 88
>BC008782-1|AAH08782.1| 1219|Homo sapiens nuclear factor of kappa
light polypeptide gene enhancer in B-cells inhibitor-li
protein.
Length = 1219
Score = 30.3 bits (65), Expect = 9.6
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 180 NNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSGRINEAHHLLQ--NKTLALPQARFL 353
N+Y F +IFLAE+ + A + LGT ++R+G+ ++A L+ + + RF+
Sbjct: 23 NDY-FRKSIFLAEQNHLYEDLFRARYNLGTIHWRAGQHSQAMRCLEGARECAHTMRKRFM 81
Query: 354 LAKC 365
++C
Sbjct: 82 ESEC 85
>AJ249601-1|CAB63467.1| 559|Homo sapiens IkappaBR protein.
Length = 559
Score = 30.3 bits (65), Expect = 9.6
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +3
Query: 180 NNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSGRINEAHHLLQ--NKTLALPQARFL 353
N+Y F +IFLAE+ + A + LGT ++R+G+ ++A L+ + + RF+
Sbjct: 23 NDY-FRKSIFLAEQNHLYEDLFRARYNLGTIHWRAGQHSQAMRCLEGARECAHTMRKRFM 81
Query: 354 LAKC 365
++C
Sbjct: 82 ESEC 85
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,552,030
Number of Sequences: 237096
Number of extensions: 2624568
Number of successful extensions: 4715
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4711
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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