Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_F22
         (877 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U18298-1|AAA57340.1|  875|Drosophila melanogaster CDC27Dm protein.    166   4e-41
BT021947-1|AAX51652.1|  900|Drosophila melanogaster LD12661p pro...   166   4e-41
AE014296-1216|AAF50592.1|  900|Drosophila melanogaster CG8610-PA...   166   4e-41

>U18298-1|AAA57340.1|  875|Drosophila melanogaster CDC27Dm protein.
          Length = 875

 Score =  166 bits (403), Expect = 4e-41
 Identities = 78/173 (45%), Positives = 116/173 (67%), Gaps = 7/173 (4%)
 Frame = +3

Query: 135 MIVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSGRINEAHHLL 314
           M++QEP+Q  +W CLN Y+F++A+FL+ERL +EV S+E  FLL T Y+RS ++++A+ LL
Sbjct: 1   MMIQEPVQAAIWHCLNYYDFKDAVFLSERLCSEVESDETIFLLATSYFRSNQVHQAYWLL 60

Query: 315 QNKTLALPQARFLLAKCSADLKSYKDAEIAL-------GSNLDIIASEFGEQAPYALQLL 473
           + K    PQ RFL AKC+ +LK Y +AE AL         N D +  +FG+ A +A QL+
Sbjct: 61  KEKARRSPQCRFLQAKCAYELKKYAEAESALISTGFADAKNCDELQRDFGDLACFAYQLM 120

Query: 474 AKVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQINNSE 632
           A++ + T R   A  A R+AL LNPFMW +FA LC +G+  D   +FQI++++
Sbjct: 121 AQICMRTERNKLAVSALRRALKLNPFMWHAFADLCLLGQDTDAAAIFQIHSTD 173


>BT021947-1|AAX51652.1|  900|Drosophila melanogaster LD12661p
           protein.
          Length = 900

 Score =  166 bits (403), Expect = 4e-41
 Identities = 78/173 (45%), Positives = 116/173 (67%), Gaps = 7/173 (4%)
 Frame = +3

Query: 135 MIVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSGRINEAHHLL 314
           M++QEP+Q  +W CLN Y+F++A+FL+ERL +EV S+E  FLL T Y+RS ++++A+ LL
Sbjct: 1   MMIQEPVQAAIWHCLNYYDFKDAVFLSERLCSEVESDETIFLLATSYFRSNQVHQAYWLL 60

Query: 315 QNKTLALPQARFLLAKCSADLKSYKDAEIAL-------GSNLDIIASEFGEQAPYALQLL 473
           + K    PQ RFL AKC+ +LK Y +AE AL         N D +  +FG+ A +A QL+
Sbjct: 61  KEKARRSPQCRFLQAKCAYELKKYAEAESALISTGFADAKNCDELQRDFGDLACFAYQLM 120

Query: 474 AKVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQINNSE 632
           A++ + T R   A  A R+AL LNPFMW +FA LC +G+  D   +FQI++++
Sbjct: 121 AQICMRTERNKLAVSALRRALKLNPFMWHAFADLCLLGQDTDAAAIFQIHSTD 173


>AE014296-1216|AAF50592.1|  900|Drosophila melanogaster CG8610-PA
           protein.
          Length = 900

 Score =  166 bits (403), Expect = 4e-41
 Identities = 78/173 (45%), Positives = 116/173 (67%), Gaps = 7/173 (4%)
 Frame = +3

Query: 135 MIVQEPIQVIVWDCLNNYEFENAIFLAERLYAEVGSEEAAFLLGTCYYRSGRINEAHHLL 314
           M++QEP+Q  +W CLN Y+F++A+FL+ERL +EV S+E  FLL T Y+RS ++++A+ LL
Sbjct: 1   MMIQEPVQAAIWHCLNYYDFKDAVFLSERLCSEVESDETIFLLATSYFRSNQVHQAYWLL 60

Query: 315 QNKTLALPQARFLLAKCSADLKSYKDAEIAL-------GSNLDIIASEFGEQAPYALQLL 473
           + K    PQ RFL AKC+ +LK Y +AE AL         N D +  +FG+ A +A QL+
Sbjct: 61  KEKARRSPQCRFLQAKCAYELKKYAEAESALISTGFADAKNCDELQRDFGDLACFAYQLM 120

Query: 474 AKVYISTGRRNEAAEAHRKALSLNPFMWKSFAQLCNMGEKVDPQQVFQINNSE 632
           A++ + T R   A  A R+AL LNPFMW +FA LC +G+  D   +FQI++++
Sbjct: 121 AQICMRTERNKLAVSALRRALKLNPFMWHAFADLCLLGQDTDAAAIFQIHSTD 173


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,651,275
Number of Sequences: 53049
Number of extensions: 830046
Number of successful extensions: 2433
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2425
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)