Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_F16
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0122 - 12095385-12095713,12096018-12096120                       29   4.9  

>06_02_0122 - 12095385-12095713,12096018-12096120
          Length = 143

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
 Frame = -2

Query: 875 PGXGNXXGGXXGKXPXXPX-GXRXXGXX*RXGRNXGXPXGVXRGXRXXFXSPXGFXTXEL 699
           PG G   GG  G     P  G    G     G   G   G  RG    +    G      
Sbjct: 60  PGGGYGYGGGYGGEYGRPGYGGGYGGGYGHPGYGGGYGGGYGRGYGGGYGGSGGGYGGGY 119

Query: 698 GSXFXXXVXGGGAYG 654
           G  +     GGG YG
Sbjct: 120 GGGYGGGYGGGGGYG 134


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,512,818
Number of Sequences: 37544
Number of extensions: 101127
Number of successful extensions: 94
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)