Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_F15
(916 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.16
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 33 0.28
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 32 0.66
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 32 0.66
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.1
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.5
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 2.0
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 30 2.0
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 30 2.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 25 2.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 25 2.4
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 25 3.0
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 25 3.0
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 3.5
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 3.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 3.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 3.5
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 25 3.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.6
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 4.6
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 29 6.1
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.1
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 6.1
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 28 8.1
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/65 (30%), Positives = 24/65 (36%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPAXWXGSIXAXKTXHT 355
PP P G P G P P P A PPP PPP + GS+ + +
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSP---PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS 320
Query: 354 SPXTG 340
P G
Sbjct: 321 PPPAG 325
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPX--PPPXPA 397
PP P G P G G P P P + PPP PPP PA
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPPPPPTGSPPPPPA 285
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/65 (30%), Positives = 24/65 (36%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPAXWXGSIXAXKTXHT 355
PP P G P G P P P A PPP PPP + GS+ + +
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSP---PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS 341
Query: 354 SPXTG 340
P G
Sbjct: 342 PPPAG 346
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPX--PPPXPA 397
PP P G P G G P P P + PPP PPP PA
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPPPPPTGSPPPPPA 306
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/65 (30%), Positives = 24/65 (36%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPAXWXGSIXAXKTXHT 355
PP P G P G P P P A PPP PPP + GS+ + +
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSP---PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS 326
Query: 354 SPXTG 340
P G
Sbjct: 327 PPPAG 331
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPX--PPPXPA 397
PP P G P G G P P P + PPP PPP PA
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPPPPPTGSPPPPPA 291
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 407 GGGXGGGSXASXPGXSRGXXGRLXGAXSPHPKAGXRPSXGXGG 535
GGG GGG A+ G + G G +P P+A P+ GG
Sbjct: 363 GGGGGGGGAAAGGGYNAGGGGGGAPQAAPAPQAAPAPAAPAGG 405
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPAXWXG 385
PP G P P P P P A PPP PPP P+ G
Sbjct: 615 PPPQSFGMAPISS--AAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPAXWXG 385
PP G P P P P P A PPP PPP P+ G
Sbjct: 441 PPPQSFGMAPISS--AAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSR---PXXPRXXPGXEAXEPPPXPPPXP 400
PP P P + E P S P P P + PPP PPP P
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSR---PXXPRXXPGXEAXEPPPXPPPXP 400
PP P P + E P S P P P + PPP PPP P
Sbjct: 769 PPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPP 816
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 401 GXGGGXGGGSXASXPGXSRGXXGRLXGAXSPHPKAGXRPSXG 526
G GGG GGG G G G +P P +G P G
Sbjct: 484 GGGGGFGGGGGGFGGGGGGFGSGSPFGGAAPSPPSGPDPDFG 525
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXX-----PRXXPGXEAXEPPPXPPP 406
PP P G P + G P P P PG PPP PPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPP 406
PP P G P + G P P P P PPP PPP
Sbjct: 727 PPPPPPGGLPPIT-GGPPP---PPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXX-----PRXXPGXEAXEPPPXPPP 406
PP P G P + G P P P PG PPP PPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPP 406
PP P G P + G P P P P PPP PPP
Sbjct: 727 PPPPPPGGLPPIT-GGPPP---PPPPGGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXX-----PRXXPGXEAXEPPPXPPP 406
PP P G P + G P P P PG PPP PPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPP 406
PP P G P + G P P P P PPP PPP
Sbjct: 310 PPPPPPGGLPPIT-GGPPP---PPPPGGLPPISGGPPPPPPPP 348
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXP 400
PP P G A G P P P P + PPP PPP P
Sbjct: 543 PPPPIAGLLAANGTNVPIP---PPPPPPLPQNLSGAPPPPPPPPP 584
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +2
Query: 401 GXGGGXGGGSXASXPGXSRGXXGRLXGAXSPHPKAGXR 514
G GGG GGG G G GR G + AG R
Sbjct: 39 GRGGGYGGGGGGGYGGGGYGGGGRGGGRGGSNGSAGGR 76
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 386 PXQXAGXGGGXGGGSXASXPGXSRG-XXGRLXGAXSPHPKAGXRPSXGXGG 535
P + GGG GGG+ ++ G G G GA S + G P G GG
Sbjct: 283 PPSGSAMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGG 333
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 386 PXQXAGXGGGXGGGSXASXPGXSRG-XXGRLXGAXSPHPKAGXRPSXGXGG 535
P + GGG GGG+ ++ G G G GA S + G P G GG
Sbjct: 177 PPSGSAMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGG 227
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 24.6 bits (51), Expect(2) = 2.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 426 PPPXPPPXPA 397
PPP PPP PA
Sbjct: 306 PPPPPPPAPA 315
Score = 23.8 bits (49), Expect(2) = 2.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 435 AXEPPPXPPPXP 400
A PPP PPP P
Sbjct: 300 AAPPPPPPPPPP 311
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 24.6 bits (51), Expect(2) = 2.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 426 PPPXPPPXPA 397
PPP PPP PA
Sbjct: 306 PPPPPPPAPA 315
Score = 23.8 bits (49), Expect(2) = 2.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 435 AXEPPPXPPPXP 400
A PPP PPP P
Sbjct: 300 AAPPPPPPPPPP 311
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 474 SRPXXPRXXPGXEAXEPPPXPPPXP 400
S+P P P + PPP PPP P
Sbjct: 204 SQPPPPPLPPNSQFMTPPPRPPPAP 228
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 24.6 bits (51), Expect(2) = 3.0
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXP 400
PP P G P L G P P P A PP PPP P
Sbjct: 521 PPPPMPGMAP-LSTGAPTPPPPP------PVGMANGGPPPPPPLP 558
Score = 23.4 bits (48), Expect(2) = 3.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 426 PPPXPPPXPA 397
PPP PPP P+
Sbjct: 577 PPPPPPPPPS 586
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 24.6 bits (51), Expect(2) = 3.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 447 PGXEAXEPPPXPPPXP 400
P ++ PPP PPP P
Sbjct: 353 PQPQSLVPPPPPPPPP 368
Score = 23.4 bits (48), Expect(2) = 3.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 426 PPPXPPPXPA 397
PPP PPP P+
Sbjct: 362 PPPPPPPPPS 371
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -2
Query: 546 FXXYPPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPA 397
F PP P P++ G S PR PG A PP PP PA
Sbjct: 123 FPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPG--AYPPPRGYPPAPA 170
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -2
Query: 546 FXXYPPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPA 397
F PP P P++ G S PR PG A PP PP PA
Sbjct: 123 FPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPG--AYPPPRGYPPAPA 170
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +2
Query: 401 GXGGGXGGGSXASXPGXSRGXXGRLXGAXSPHPKAGXRPSXGXGG 535
G GGG GGG S G G G G+ S G GG
Sbjct: 51 GTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGG 95
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = -2
Query: 531 PXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPA 397
P P PA + P P P P PPP PPP PA
Sbjct: 481 PNPSPSPQPAEV-SKSPPPPPPLPPIATPSSVPPPPPPPPPPPPA 524
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPA 397
PP P G P G P P P PPP PPP PA
Sbjct: 218 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAP------PPPPPPPPPA 257
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPA 397
PP P G P G P P P PPP PPP PA
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAP------PPPPPPPPPA 243
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPA 397
PP P G P G P P P PPP PPP PA
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAP------PPPPPPPPPA 243
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 24.6 bits (51), Expect(2) = 3.8
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 426 PPPXPPPXPA 397
PPP PPP PA
Sbjct: 86 PPPPPPPQPA 95
Score = 23.4 bits (48), Expect(2) = 3.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 435 AXEPPPXPPPXP 400
A PPP PPP P
Sbjct: 81 AAVPPPPPPPPP 92
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPA 397
PP P R P G P P P PG PP PP P+
Sbjct: 335 PPPPPGMRYP----GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 376
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 531 PXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPP 409
P P R P+ G G P P P P PPP PP
Sbjct: 348 PPPPPPRYPSAGPGMYPPPP-PSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -2
Query: 534 PPXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPA 397
PP P R P G P P P PG PP PP P+
Sbjct: 345 PPPPPGMRYP----GGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 386
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 531 PXPXXGRXPALG*GEXAPXSRPXXPRXXPGXEAXEPPPXPP 409
P P R P+ G G P P P P PPP PP
Sbjct: 358 PPPPPPRYPSAGPGMYPPPP-PSRPPAPPSGHGMIPPPPPP 397
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +2
Query: 401 GXGGGXGGGSXASXPGXSRGXXGRLXGAXSPHPKAGXRPSXGXGG 535
G GGG GGG S G G GR G R G GG
Sbjct: 217 GGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRGYGGGGG 261
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -2
Query: 498 G*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPA 397
G GE AP S P P A PPP P P PA
Sbjct: 401 GGGEAAPPSSP------PADAAPAPPPAPEPVPA 428
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 401 GXGGGXGGGSXASXPGXSRGXXGRLXG 481
G GGG GGG G RG GR G
Sbjct: 110 GRGGGGGGGGGRGGGGGGRGGGGRGRG 136
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -2
Query: 498 G*GEXAPXSRPXXPRXXPGXEAXEPPPXPPPXPAXWXG 385
G G AP + P P PPP PPP P G
Sbjct: 28 GGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPPMCGCG 65
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 398 AGXGGGXGGGSXASXPGXSRGXXGRLXGAXSPHPKAGXRPS 520
+G GGG GG S + G G G + G S K +P+
Sbjct: 9 SGGGGGGGGASGGAGGGAPGGGGGGIRGFFSKLRKPSDQPN 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,731,084
Number of Sequences: 27780
Number of extensions: 116888
Number of successful extensions: 1600
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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