Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_F14
(849 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 42 7e-04
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 42 7e-04
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 39 0.004
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 32 0.59
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 32 0.59
AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical ... 31 0.78
U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL033508-4|CAE45091.1| 430|Caenorhabditis elegans Hypothetical ... 29 4.2
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical... 29 4.2
Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical pr... 29 5.5
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 28 7.3
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 28 7.3
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +3
Query: 435 LTCSNTSVQDNKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVIK 614
L SN + ++L+ L+ Y NL + +I N++I +L D+F T P L +DLS N +
Sbjct: 51 LDLSNNRI--SRLSADELSLYPNL-EQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLL 107
Query: 615 KTGNGLFAQFGRLIT 659
N +F++ L T
Sbjct: 108 SLPNEVFSKLKNLKT 122
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/75 (33%), Positives = 41/75 (54%)
Frame = +3
Query: 435 LTCSNTSVQDNKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVIK 614
L SN + ++L+ L+ Y NL + +I N++I +L D+F T P L +DLS N +
Sbjct: 51 LDLSNNRI--SRLSADELSLYPNL-EQLILHNNSITHLSADVFSTLPSLRVLDLSSNSLL 107
Query: 615 KTGNGLFAQFGRLIT 659
N +F++ L T
Sbjct: 108 SLPNEVFSKLKNLKT 122
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = +3
Query: 507 LDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVI 611
L+T++++N+ ++ L +D FK +LSY+D+SGN I
Sbjct: 160 LETVVFSNNKLDSLGVDQFKNKKQLSYLDVSGNFI 194
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = +3
Query: 507 LDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVI 611
L+T++++N+ ++ L +D FK +LSY+D+SGN I
Sbjct: 160 LETVVFSNNKLDSLGVDQFKNKKQLSYLDVSGNFI 194
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 31.9 bits (69), Expect = 0.59
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 465 NKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVIK 614
N L+K+ NL + +N++I +E L +FP L Y+DLS N I+
Sbjct: 57 NSLSKSNFQALPNL-QYLDLSNNSIRDIEETLLDSFPGLKYLDLSWNKIR 105
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 31.9 bits (69), Expect = 0.59
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 465 NKLTKTTLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVIK 614
N L+K+ NL + +N++I +E L +FP L Y+DLS N I+
Sbjct: 57 NSLSKSNFQALPNL-QYLDLSNNSIRDIEETLLDSFPGLKYLDLSWNKIR 105
>AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical
protein Y46H3D.6 protein.
Length = 345
Score = 31.5 bits (68), Expect = 0.78
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 226 ENECLRRVCCRCKITWIMQVGVKCGRVL 309
EN+ LRR+C +C+ +QVG++ VL
Sbjct: 56 ENQVLRRLCAKCRYEKCVQVGMRTSAVL 83
>U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical
protein K03A1.2b protein.
Length = 584
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 423 DDEHLTCSNTSVQDNKLTKT-TLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLS 599
D E +T T + ++L L K+ + + + + I +++ D+FK F L+ + LS
Sbjct: 177 DFEPITAKFTKNKISRLQNDKVLPKFEKFVSILDVSYNEIRFIDNDVFKPFTNLTKLYLS 236
Query: 600 GNVIKKTGNGLF 635
NV++ +F
Sbjct: 237 HNVLQTVKKDVF 248
>U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical
protein K03A1.2a protein.
Length = 586
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 423 DDEHLTCSNTSVQDNKLTKT-TLAKYGNLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLS 599
D E +T T + ++L L K+ + + + + I +++ D+FK F L+ + LS
Sbjct: 177 DFEPITAKFTKNKISRLQNDKVLPKFEKFVSILDVSYNEIRFIDNDVFKPFTNLTKLYLS 236
Query: 600 GNVIKKTGNGLF 635
NV++ +F
Sbjct: 237 HNVLQTVKKDVF 248
>AL033508-4|CAE45091.1| 430|Caenorhabditis elegans Hypothetical
protein Y106G6G.6 protein.
Length = 430
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 665 CSSNQSTELREQAVSSLLDNVSAQID-VRQSWK 570
CS N S E +EQ +SSL V +Q D + WK
Sbjct: 167 CSENCSEETKEQFLSSLSQLVQSQADKIGSGWK 199
>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
protein T05H4.3 protein.
Length = 1152
Score = 29.1 bits (62), Expect = 4.2
Identities = 8/21 (38%), Positives = 18/21 (85%)
Frame = +3
Query: 549 EIDLFKTFPRLSYIDLSGNVI 611
+++L KT P+L+++D+S N++
Sbjct: 754 DVELLKTMPKLTHLDMSNNIL 774
>Z34802-6|CAB54282.1| 594|Caenorhabditis elegans Hypothetical
protein M88.6b protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 501 NLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVIKKTGNGLFAQFGRLI 656
N L+ +I +N+N+ ++ +F L +DL N I F + +L+
Sbjct: 223 NSLEQLILSNNNLENIDWTIFSALKNLRVLDLGSNKISNVEMKSFPKLEKLV 274
>Z34802-5|CAA84337.1| 610|Caenorhabditis elegans Hypothetical
protein M88.6a protein.
Length = 610
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = +3
Query: 501 NLLDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGNVIKKTGNGLFAQFGRLI 656
N L+ +I +N+N+ ++ +F L +DL N I F + +L+
Sbjct: 223 NSLEQLILSNNNLENIDWTIFSALKNLRVLDLGSNKISNVEMKSFPKLEKLV 274
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +2
Query: 560 VQNISKTVVHRFERKRYQEDWKRPVRAVRSTDYLNISRNQLEDIPRSTFADXKI 721
++ ++ T+ H K + +R + S + L ISRN++ED P + K+
Sbjct: 162 IRRLAPTLAHLDFSKNDIRSLQSQLRYLTSLEVLKISRNRVEDFPAELCSSLKL 215
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -2
Query: 608 NVSAQIDVRQSWKCFEQINFEVVNIRVCPDYCI*EVSVFGERRLS*LVVLDGRIGAGQ 435
N +D+ SW QINF VN+R + + + E + V + GR G+G+
Sbjct: 1100 NTRQGLDIESSWPANGQINFSEVNLRYRKSHPLALNDITFEIKGGEKVGIIGRTGSGK 1157
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -2
Query: 608 NVSAQIDVRQSWKCFEQINFEVVNIRVCPDYCI*EVSVFGERRLS*LVVLDGRIGAGQ 435
N +D+ SW QINF VN+R + + + E + V + GR G+G+
Sbjct: 1073 NTRQGLDIESSWPANGQINFSEVNLRYRKSHPLALNDITFEIKGGEKVGIIGRTGSGK 1130
>Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical
protein F20D1.7 protein.
Length = 695
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 507 LDTIIWTNSNINYLEIDLFKTFPRLSYIDLSGN 605
+ +I N+ I + + +F+ P L +DLSGN
Sbjct: 152 IQRVILRNNQIKSIGVHVFRYMPTLKMLDLSGN 184
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -2
Query: 608 NVSAQIDVRQSWKCFEQINFEVVNIRVCPDYCI*EVSVFGERRLS*LVVLDGRIGAGQ 435
N +D+ SW QINF VN+R + + + E + V + GR G+G+
Sbjct: 1100 NTRQGLDIESSWPANGQINFSEVNLRYRKSHPLALNDITFEIKGGEKVGIIGRTGSGK 1157
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -2
Query: 608 NVSAQIDVRQSWKCFEQINFEVVNIRVCPDYCI*EVSVFGERRLS*LVVLDGRIGAGQ 435
N +D+ SW QINF VN+R + + + E + V + GR G+G+
Sbjct: 1073 NTRQGLDIESSWPANGQINFSEVNLRYRKSHPLALNDITFEIKGGEKVGIIGRTGSGK 1130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,075,074
Number of Sequences: 27780
Number of extensions: 305981
Number of successful extensions: 865
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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