Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_F13
(850 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 94 3e-20
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 94 3e-20
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 73 5e-14
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 60 3e-10
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 55 1e-08
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 35 0.013
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 33 0.051
SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.27
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 31 0.27
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 28 1.5
SPBC20F10.10 |||cyclin pho85 family|Schizosaccharomyces pombe|ch... 28 1.9
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.5
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 27 4.4
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 26 7.8
SPAC16A10.05c |dad1||DASH complex subunit Dad1|Schizosaccharomyc... 26 7.8
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 22 8.8
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 93.9 bits (223), Expect = 3e-20
Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Frame = +1
Query: 358 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 537
A L +G +P I LGT T V A+ GYR IDTA+IYGNEK IG+ I+
Sbjct: 13 AYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR-- 70
Query: 538 IDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSS 717
+ V R ++++ KLW HR LV A +L DL LE+ D +LIH P +L G
Sbjct: 71 --ESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLSGPEE 128
Query: 718 IPK-ISSVIQYSEFDYMDAWFGMEDLV 795
+P+ + Y + + W ME+L+
Sbjct: 129 LPRNEKGELIYEDVPIEETWQAMEELL 155
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 93.9 bits (223), Expect = 3e-20
Identities = 54/143 (37%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Frame = +1
Query: 370 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 549
L DG+ +P + LGT P T V+TA+ GYR ID A IYGNE +G IK + G
Sbjct: 18 LADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK---ESG 74
Query: 550 TVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKEGNSSIPK- 726
R+D +++ KLW H + V A +L DL L++ D +LIH P+S K G PK
Sbjct: 75 VPRKD-IWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDKFPKD 133
Query: 727 ISSVIQYSEFDYMDAWFGMEDLV 795
+ Y + + W ME L+
Sbjct: 134 KDGNLIYEKNPIEETWKAMEKLL 156
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 72.9 bits (171), Expect = 5e-14
Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Frame = +1
Query: 343 SVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGK 522
S E T+ L +G +P I G +L +V A+D GYR IDTA +YGNE + GK
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGK 63
Query: 523 AIKNKIDDGTVRRDELFIMGKL--WSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMS 696
AI + + V+R ++F+ KL S ++ T A R SL LG + DLFLI +P
Sbjct: 64 AIVDWCEKNNVKRTDIFLTSKLANCSDYYST---RAAIRSSLHHLG-TYIDLFLIQSPAG 119
Query: 697 LKE 705
K+
Sbjct: 120 GKK 122
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 60.5 bits (140), Expect = 3e-10
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Frame = +1
Query: 388 MPVIALGTALLPP------RLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 549
+P +GTAL R + V+ A+ G+ ID A +YGNE+ +G A+K +
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK----EA 67
Query: 550 TVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSLKE 705
V R +LFI K+ H D + A SL LG ++ DL+L+H+P+ E
Sbjct: 68 NVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDLYLLHSPIPFYE 116
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 54.8 bits (126), Expect = 1e-08
Identities = 32/109 (29%), Positives = 57/109 (52%)
Frame = +1
Query: 364 LKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 543
+KL +G P A G+ ++ + V A+ GYR ID+A +Y NE G+AI ++
Sbjct: 6 VKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFME 65
Query: 544 DGTVRRDELFIMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNP 690
+ +R++++ KL + ++ S+ GL + DLFL+H+P
Sbjct: 66 ETGTKREDIWFTSKL-NDLSGYKSTLSSIDASVKACGLGYIDLFLLHSP 113
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 35.1 bits (77), Expect = 0.013
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Frame = +1
Query: 433 TTEIVETAIDMGYRAIDTAYIYGN---EKLIGKAIKN---KIDDGTVRRDELFIMG-KLW 591
T ++ A D+G DTA IY N E ++GKAIK + + F G KL
Sbjct: 46 TKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGWDRSEYVITTKVFFGAGTKLP 105
Query: 592 ST--FHRTDLVETACRISLADLGLEFFDLFLIHNP 690
+T R ++E SL LGL + D+ + H P
Sbjct: 106 NTTGLSRKHIIE-GLNASLKRLGLPYVDVIMAHRP 139
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 33.1 bits (72), Expect = 0.051
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Frame = +1
Query: 442 IVETAIDMGYRAIDTAYIYG---NEKLIGKAIKNKIDDGTVRRDELFIMGKLW------- 591
++ A D+G D++ +YG NE+ IG+ K T RR E+F+ K
Sbjct: 38 VLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQ-----TGRRKEIFLATKFGYEKNPET 92
Query: 592 ---STFHRTDLVETACRISLADLGLEFFDLFLIH 684
S + D +E A +SL LG++ DL+ +H
Sbjct: 93 GELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVH 126
Score = 29.1 bits (62), Expect = 0.83
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -2
Query: 693 HRIVDEEEVEKLQAQVCQ*NPAGRLHQIGAMECTPQFTHNEKLVSPHGAVVNLVLDRFSY 514
HR E +EK+ + + AG++ IG EC+ V P A V + FS
Sbjct: 126 HRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSA-VQVEYSPFSL 184
Query: 513 EL 508
E+
Sbjct: 185 EI 186
>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 773
Score = 30.7 bits (66), Expect = 0.27
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Frame = +1
Query: 337 KGSVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLI 516
K S+K++ G ++ G A++P L +++ A +G R + G +LI
Sbjct: 366 KSSLKKMNQNSQLTGYIAVLLKKGLAIVPYTLPIKML-LADAVGKRTSKIGKLRGTNELI 424
Query: 517 GKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVETACRISLADL--GLEFFDLFL--IH 684
G+ + K +G RD+L +L R +L+ SLA+ +EF FL +
Sbjct: 425 GEGVLTKSKNGPSMRDQLLKNIQLQDHSLRDELISLR---SLAEQKNTIEFDAKFLGVVE 481
Query: 685 NPMSLKEGNSSIPKISSVI 741
+ N I K SSV+
Sbjct: 482 RYQNQYANNCKILKTSSVL 500
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 30.7 bits (66), Expect = 0.27
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = -3
Query: 332 LASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQIIF 159
++SFS+ + +LY + +S VS +PL + L G S+LT +I++ K+ Q ++
Sbjct: 49 ISSFSTHLNILYFNLSKSMVSFAQVPL-EEYLNLLGHSLLTSIIYVMLKRRFYEQSVY 105
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 389 MNVPSRSFKVAT-SFTLPFSLASFSSAILVLYCSSVRSPVSRFCL 258
MN+ F + T ++TLPF + + + A++V +S V+ CL
Sbjct: 726 MNISEGDFLIRTQAYTLPFLVLTKNKALIVRIAELSQSDVATLCL 770
>SPBC20F10.10 |||cyclin pho85 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 243
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -3
Query: 344 LPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQI 165
+P S S + L+ +V S + L + CP D L+ +I+L+ H+ +
Sbjct: 58 IPLSPTSLKNPCLIFSAKNVPSISIQAYLTRILKYCPATNDVFLSVLIYLDRIVHHFHFT 117
Query: 164 IFI 156
+FI
Sbjct: 118 VFI 120
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 383 VPSRSFKVATSFTLPFSLASFSSAILV 303
+PS+ F++ T F PF+ FS +++V
Sbjct: 177 LPSQRFEIVTGFLSPFNKLYFSKSLIV 203
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 461 SIAVSTISVVNRGGSKAVPKAMTGMNVPSRSFKVA--TSFTLPFSLASFSS 315
SI STI+ GS+ +TG N P + +V T+ T +L S SS
Sbjct: 99 SIITSTITTTITSGSQLYTTTITGQNTPVDTVEVVIPTAGTFTTTLTSGSS 149
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -3
Query: 350 FTLPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTE 207
F+ P++LA S +L + P + CL L R P D++ ++
Sbjct: 301 FSPPWNLAFASMLSQLLKWDPAKRPTAEMCLDLEFCRVSAPADAVASK 348
>SPAC16A10.05c |dad1||DASH complex subunit Dad1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 85
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -3
Query: 149 DFTKDFQNKN*KNIQNLRFSKTRRLLS 69
D T++ QN+ K+ ++ F + RRLL+
Sbjct: 2 DITENIQNEQNKDFDDIDFERRRRLLT 28
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 22.2 bits (45), Expect(2) = 8.8
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -3
Query: 467 PISIAVSTISVVNRGGSKAVPKAMTGMNVPSRSFK 363
P+++ + +V + S VP+++ ++ PSR K
Sbjct: 131 PLAVNTADTTVSHSTSSSNVPRSLNKIHDPSRFIK 165
Score = 21.4 bits (43), Expect(2) = 8.8
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 629 QAVSTRSVRWNVLHNLPIMKSSSRLTVPSS 540
Q+ S +++W + I+K ++ VP+S
Sbjct: 75 QSSSLNNLKWKDVEGPNILKPIKKIAVPAS 104
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,376,296
Number of Sequences: 5004
Number of extensions: 70886
Number of successful extensions: 270
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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