Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_F12
(904 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 76 4e-14
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 76 4e-14
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 71 9e-13
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 71 9e-13
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 71 9e-13
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 65 6e-11
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 65 6e-11
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 60 2e-09
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 54 1e-07
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 54 1e-07
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 47 2e-05
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 47 2e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 47 2e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 44 2e-04
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 44 2e-04
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 44 2e-04
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 44 2e-04
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 44 2e-04
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 40 0.002
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.002
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 40 0.002
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 0.004
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 38 0.007
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 38 0.007
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 38 0.007
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 38 0.007
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 38 0.007
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 38 0.007
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 38 0.007
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 38 0.007
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 38 0.013
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 38 0.013
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 38 0.013
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 37 0.017
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 37 0.023
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 36 0.040
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 36 0.052
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 36 0.052
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 36 0.052
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 35 0.092
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 35 0.092
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 34 0.16
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 34 0.16
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 34 0.16
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 33 0.28
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.37
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 32 0.49
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 32 0.49
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 32 0.65
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 32 0.65
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 32 0.65
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 32 0.65
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 2.0
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 30 2.0
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 30 2.0
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 30 2.0
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 30 2.6
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 2.6
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 29 6.0
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/78 (41%), Positives = 49/78 (62%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
+ FVGGL S+ S+ ++R+ F +FG + ++E PFDK R+ F FI FE E+ +
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Query: 265 PKRTIGGKEVDVKRATPK 318
K+T G +E DVK+A P+
Sbjct: 171 TKQTFGTRECDVKKAVPQ 188
Score = 60.5 bits (140), Expect = 2e-09
Identities = 23/75 (30%), Positives = 49/75 (65%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
+ FVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 265 PKRTIGGKEVDVKRA 309
++TI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 75.8 bits (178), Expect = 4e-14
Identities = 32/78 (41%), Positives = 49/78 (62%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
+ FVGGL S+ S+ ++R+ F +FG + ++E PFDK R+ F FI FE E+ +
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Query: 265 PKRTIGGKEVDVKRATPK 318
K+T G +E DVK+A P+
Sbjct: 171 TKQTFGTRECDVKKAVPQ 188
Score = 60.5 bits (140), Expect = 2e-09
Identities = 23/75 (30%), Positives = 49/75 (65%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
+ FVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 265 PKRTIGGKEVDVKRA 309
++TI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 71.3 bits (167), Expect = 9e-13
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 255
++ + FVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+
Sbjct: 21 NLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAA 80
Query: 256 LKTPKRTIGGKEVDVKRATPKPD 324
+K I GK VD KRA P+ D
Sbjct: 81 MKQRPHIIDGKTVDPKRAVPRDD 103
Score = 52.0 bits (119), Expect = 6e-07
Identities = 20/80 (25%), Positives = 43/80 (53%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
R +V G+ + ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 265 PKRTIGGKEVDVKRATPKPD 324
+ G DV++ K +
Sbjct: 175 KSHMVNGHRCDVRKGLSKDE 194
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 71.3 bits (167), Expect = 9e-13
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 255
++ + FVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+
Sbjct: 21 NLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAA 80
Query: 256 LKTPKRTIGGKEVDVKRATPKPD 324
+K I GK VD KRA P+ D
Sbjct: 81 MKQRPHIIDGKTVDPKRAVPRDD 103
Score = 52.0 bits (119), Expect = 6e-07
Identities = 20/80 (25%), Positives = 43/80 (53%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
R +V G+ + ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 265 PKRTIGGKEVDVKRATPKPD 324
+ G DV++ K +
Sbjct: 175 KSHMVNGHRCDVRKGLSKDE 194
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 71.3 bits (167), Expect = 9e-13
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 255
++ + FVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+
Sbjct: 21 NLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAA 80
Query: 256 LKTPKRTIGGKEVDVKRATPKPD 324
+K I GK VD KRA P+ D
Sbjct: 81 MKQRPHIIDGKTVDPKRAVPRDD 103
Score = 52.0 bits (119), Expect = 6e-07
Identities = 20/80 (25%), Positives = 43/80 (53%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
R +V G+ + ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 265 PKRTIGGKEVDVKRATPKPD 324
+ G DV++ K +
Sbjct: 175 KSHMVNGHRCDVRKGLSKDE 194
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 65.3 bits (152), Expect = 6e-11
Identities = 29/90 (32%), Positives = 54/90 (60%)
Frame = +1
Query: 49 K*TQRRLKHDMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
K TQ +L + F+GGLS+ + ++++ +F +G + + + FDK + +GF F+TF
Sbjct: 123 KRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
Query: 229 ESEQVVNDLLKTPKRTIGGKEVDVKRATPK 318
+S++V + + + I GK V+ K+A PK
Sbjct: 183 DSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/81 (34%), Positives = 46/81 (56%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 255
D G+ F+GGLS + + + +R++F FG + E + D + +GF FITF V+ +
Sbjct: 43 DPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
Query: 256 LKTPKRTIGGKEVDVKRATPK 318
L + + GK++D K A PK
Sbjct: 103 LNNREHELDGKKIDPKVAFPK 123
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 65.3 bits (152), Expect = 6e-11
Identities = 29/90 (32%), Positives = 54/90 (60%)
Frame = +1
Query: 49 K*TQRRLKHDMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
K TQ +L + F+GGLS+ + ++++ +F +G + + + FDK + +GF F+TF
Sbjct: 123 KRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
Query: 229 ESEQVVNDLLKTPKRTIGGKEVDVKRATPK 318
+S++V + + + I GK V+ K+A PK
Sbjct: 183 DSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/81 (34%), Positives = 46/81 (56%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 255
D G+ F+GGLS + + + +R++F FG + E + D + +GF FITF V+ +
Sbjct: 43 DPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
Query: 256 LKTPKRTIGGKEVDVKRATPK 318
L + + GK++D K A PK
Sbjct: 103 LNNREHELDGKKIDPKVAFPK 123
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 60.5 bits (140), Expect = 2e-09
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
+ F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 265 PKRTIGGKEVDVKRATPK 318
+GGK VD KRA P+
Sbjct: 110 RPHKLGGKTVDSKRAIPR 127
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 60.5 bits (140), Expect = 2e-09
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
+ F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 265 PKRTIGGKEVDVKRATPK 318
+GGK VD KRA P+
Sbjct: 130 RPHKLGGKTVDSKRAIPR 147
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 60.5 bits (140), Expect = 2e-09
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
+ F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 265 PKRTIGGKEVDVKRATPK 318
+GGK VD KRA P+
Sbjct: 131 RPHKLGGKTVDSKRAIPR 148
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +1
Query: 130 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 309
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 310 TPKPD 324
P+ D
Sbjct: 61 VPRDD 65
Score = 52.0 bits (119), Expect = 6e-07
Identities = 20/80 (25%), Positives = 43/80 (53%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
R +V G+ + ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 265 PKRTIGGKEVDVKRATPKPD 324
+ G DV++ K +
Sbjct: 137 KSHMVNGHRCDVRKGLSKDE 156
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +1
Query: 130 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 309
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 310 TPKPD 324
P+ D
Sbjct: 61 VPRDD 65
Score = 52.0 bits (119), Expect = 6e-07
Identities = 20/80 (25%), Positives = 43/80 (53%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
R +V G+ + ++D + +F+++GT+ + E+ DK + +GF F+TF+ V+ +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 265 PKRTIGGKEVDVKRATPKPD 324
+ G DV++ K +
Sbjct: 137 KSHMVNGHRCDVRKGLSKDE 156
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 240
FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 21 FVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 261
R FVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 262 TPKR 273
TPK+
Sbjct: 126 TPKQ 129
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
+ FVGGL SD + +F +FG I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 265 PKRTIGGKEVDVKRA 309
P I G++ +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 261
R FVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 262 TPKR 273
TPK+
Sbjct: 127 TPKQ 130
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 46.0 bits (104), Expect = 4e-05
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +1
Query: 58 QRRLKHDMG-RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 234
Q R++ G +V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE
Sbjct: 334 QERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEK 392
Query: 235 -EQVVNDLLKTPKRTIGGKEVDVKRATPKPD 324
E+ + + IG K + V A K D
Sbjct: 393 PEEATAAVTDMNSKMIGAKPLYVALAQRKED 423
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 46.0 bits (104), Expect = 4e-05
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +1
Query: 58 QRRLKHDMG-RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 234
Q R++ G +V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE
Sbjct: 334 QERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEK 392
Query: 235 -EQVVNDLLKTPKRTIGGKEVDVKRATPKPD 324
E+ + + IG K + V A K D
Sbjct: 393 PEEATAAVTDMNSKMIGAKPLYVALAQRKED 423
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 64 RLKHDMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 234
R + D V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 170 RNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/67 (28%), Positives = 39/67 (58%)
Frame = +1
Query: 40 DLRK*TQRRLKHDMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 219
DL+K + K D ++GGLS +S+ ++ FS++G ++ + + DK + KGF F
Sbjct: 25 DLKKSWHQTYK-DSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAF 83
Query: 220 ITFESEQ 240
+ ++ ++
Sbjct: 84 LCYKDQR 90
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTP 267
FVG L SEI ++R F +FG + E ++ D N+ KG+ F+++ E + +
Sbjct: 135 FVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMN 194
Query: 268 KRTIGGKEVDVKRATPKPD 324
+G + + AT KPD
Sbjct: 195 GAWLGRRTIRTNWATRKPD 213
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 267
+VG +++ + +DEIR F FG I EV + +G+ F+ FE+ E +++
Sbjct: 259 YVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKIQGYAFVKFETKESAARAIVQMN 311
Query: 268 KRTIGGKEV 294
IGG+ V
Sbjct: 312 NADIGGQIV 320
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 261
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 322 FLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 32.3 bits (70), Expect = 0.49
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFESEQ 240
+ FVGG+S ++ I FF +FGT+ V+ P + N R + F+ + EQ
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQ 264
Query: 241 VVNDLLKTPKR 273
V L+ R
Sbjct: 265 SVIKLMSACHR 275
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 261
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 322 FLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 32.3 bits (70), Expect = 0.49
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFESEQ 240
+ FVGG+S ++ I FF +FGT+ V+ P + N R + F+ + EQ
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQ 264
Query: 241 VVNDLLKTPKR 273
V L+ R
Sbjct: 265 SVIKLMSACHR 275
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 261
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 108 FLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 261
F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L+
Sbjct: 322 FLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRALE 378
Score = 32.3 bits (70), Expect = 0.49
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFESEQ 240
+ FVGG+S ++ I FF +FGT+ V+ P + N R + F+ + EQ
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQ 264
Query: 241 VVNDLLKTPKR 273
V L+ R
Sbjct: 265 SVIKLMSACHR 275
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/96 (23%), Positives = 44/96 (45%)
Frame = +1
Query: 28 GIP*DLRK*TQRRLKHDMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 207
G+ ++ K + R K+ ++ + ++ ++F +G+I V M +D +
Sbjct: 7 GVTTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHR 66
Query: 208 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 315
GF ITF+S+ N ++ I G VDV+ P
Sbjct: 67 GFASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 42.3 bits (95), Expect = 5e-04
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTP 267
FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+ + +
Sbjct: 25 FVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMN 84
Query: 268 KRTIGGKEVDVKRATPKP 321
+ +G + + AT KP
Sbjct: 85 GQWLGRRTIRTNWATRKP 102
Score = 32.7 bits (71), Expect = 0.37
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 267
+VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 131 YVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMN 183
Query: 268 KRTIGGKEV 294
+ +GG+ V
Sbjct: 184 NQDVGGQLV 192
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 42.3 bits (95), Expect = 5e-04
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTP 267
FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+ + +
Sbjct: 35 FVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMN 94
Query: 268 KRTIGGKEVDVKRATPKP 321
+ +G + + AT KP
Sbjct: 95 GQWLGRRTIRTNWATRKP 112
Score = 32.7 bits (71), Expect = 0.37
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 267
+VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 141 YVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMN 193
Query: 268 KRTIGGKEV 294
+ +GG+ V
Sbjct: 194 NQDVGGQLV 202
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 42.3 bits (95), Expect = 5e-04
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTP 267
FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+ + +
Sbjct: 138 FVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMN 197
Query: 268 KRTIGGKEVDVKRATPKP 321
+ +G + + AT KP
Sbjct: 198 GQWLGRRTIRTNWATRKP 215
Score = 32.7 bits (71), Expect = 0.37
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 267
+VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 244 YVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMN 296
Query: 268 KRTIGGKEV 294
+ +GG+ V
Sbjct: 297 NQDVGGQLV 305
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 42.3 bits (95), Expect = 5e-04
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTP 267
FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+ + +
Sbjct: 106 FVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMN 165
Query: 268 KRTIGGKEVDVKRATPKP 321
+ +G + + AT KP
Sbjct: 166 GQWLGRRTIRTNWATRKP 183
Score = 32.7 bits (71), Expect = 0.37
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 267
+VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 212 YVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMN 264
Query: 268 KRTIGGKEV 294
+ +GG+ V
Sbjct: 265 NQDVGGQLV 273
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 195
+VG L S +++D I F++ G++ + ++ FD+ K
Sbjct: 49 YVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/50 (32%), Positives = 34/50 (68%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 240
FVG LS ++S++ +++ F++FG + E ++ D + KG+ F++F ++Q
Sbjct: 138 FVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQ 187
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 240
++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 110 YIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 240
++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 84 YIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFS-EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 249
FVG L EI++D + FFS + G + V + DK + KGF F+ F+ + V+
Sbjct: 249 FVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEM 177
FVG + +++ +R FS+FGTI V M
Sbjct: 146 FVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 267
FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 377 FVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSLN 435
Query: 268 KRTIGGKEVDV--KRATP 315
+ GK + V K +TP
Sbjct: 436 GTNLAGKTLQVVFKSSTP 453
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 270
FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 58 FVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSN 117
Query: 271 RT-IGGKEVDV 300
T + G+ V V
Sbjct: 118 DTDLLGQNVKV 128
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 270
+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 16 YVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 75
Query: 271 R-TIGGKEVDVKRAT 312
+ GK + V +A+
Sbjct: 76 MIKLYGKPIKVNKAS 90
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 28 GIP*DLRK*TQRRLKHDMG-RFFVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQ 201
G P + K + D+G FVG L E+ + + + FS FG IL+V ++ D
Sbjct: 81 GKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGT 140
Query: 202 RKGFCFITFESEQVVNDLLK 261
KGF FI F S + + L+
Sbjct: 141 SKGFAFINFASFEASDTALE 160
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 270
+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 26 YVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 85
Query: 271 R-TIGGKEVDVKRAT 312
+ GK + V +A+
Sbjct: 86 MIKLYGKPIKVNKAS 100
Score = 39.5 bits (88), Expect = 0.003
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 28 GIP*DLRK*TQRRLKHDMG-RFFVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQ 201
G P + K + D+G FVG L E+ + + + FS FG IL+V ++ D
Sbjct: 91 GKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGT 150
Query: 202 RKGFCFITFESEQVVNDLLK 261
KGF FI F S + + L+
Sbjct: 151 SKGFAFINFASFEASDTALE 170
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/79 (22%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 261
R F G L +E+SD+ + F ++ + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 262 TPKRTIGGKEVDVKRATPK 318
+ +G + + ++++ K
Sbjct: 264 MDGKYVGNRPIKLRKSAWK 282
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 237
+VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 8 YVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +1
Query: 100 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 279
G+ + +D+ + +F + GT++ E+ K+ KGF F+ S N +L P+ I
Sbjct: 179 GVDFKTTDECFQKYFEDIGTVVFCEIK-RKSDGNSKGFGFVRMSSVGEQNKVLAIPQHMI 237
Query: 280 GGKEVDVK 303
G+ DVK
Sbjct: 238 DGRRCDVK 245
Score = 35.9 bits (79), Expect = 0.040
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 79 MGRFFVGGLSSEISDDEIRNFFS-EFGTILEVEMPFDK-TKNQRKGFCFITFESEQVVND 252
+ R FVG L+ ++ + ++R F E + +E + D +GF F+T S +
Sbjct: 258 ISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAAER 317
Query: 253 LLKTPKRTIGGKEVDVKRATPKPD 324
++ T+ G V + A P+ +
Sbjct: 318 IVSKGSLTVNGLSVGLSIAQPREE 341
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE-SEQVVNDLLKTP 267
+VGG + ++++ + F FG ++ + +P D + +GF F+ F+ +E +
Sbjct: 14 YVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMN 73
Query: 268 KRTIGGKEVDVKRATP 315
+ + GK + V A P
Sbjct: 74 ESELFGKTIRVNFARP 89
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 38.3 bits (85), Expect = 0.007
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 237
+VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 7 YVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 255
+ + FV + + +DDE++ FS+FGT+ V K + KG F+ F++E
Sbjct: 681 EKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKC 739
Query: 256 LKT-PKRTIGGKEVDVKRATP 315
+ + K + +E++V + P
Sbjct: 740 VASGDKLMLRERELEVALSNP 760
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
D + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
+ F+G LS + +++ +R F++FG I + + D+ R G F+TF
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
D + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
+ F+G LS + +++ +R F++FG I + + D+ R G F+TF
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
D + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
+ F+G LS + +++ +R F++FG I + + D+ R G F+TF
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
D + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
+ F+G LS + +++ +R F++FG I + + D+ R G F+TF
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
D + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
+ F+G LS + +++ +R F++FG I + + D+ R G F+TF
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
D + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
D + FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
+ F+G LS + +++ +R F++FG I + + D+ R G F+TF
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSR-GCAFVTF 189
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
D + FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 70 KHDMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 231
K D + F+G LS + S+DE+R F+ FG + EV + KG F+ ++
Sbjct: 120 KMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 37.5 bits (83), Expect = 0.013
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 237
+VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 9 YVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 76 DMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
D + FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 27 DAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 70 KHDMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 231
K D + F+G LS + S+DE+R F+ FG + EV + KG F+ ++
Sbjct: 120 KMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPF-DKTKNQRKGFCFITFESEQVVNDLL 258
R +VGG S+ +S ++IRN ++ EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 36.7 bits (81), Expect = 0.023
Identities = 19/89 (21%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +1
Query: 58 QRRLKHDMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 237
+ + + D +VG + + +EI F G++ V + D+ KGF ++ F +
Sbjct: 70 EEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEK 129
Query: 238 QVVNDLLKTPKRTIGGKEVDV-KRATPKP 321
+ + + L + G+++ V + T KP
Sbjct: 130 EGMQNALAMTDSLLRGRQIKVDPKRTNKP 158
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 36.3 bits (80), Expect = 0.030
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 94 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
V LSS ++ ++R+ F EFG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 35.9 bits (79), Expect = 0.040
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 240
+VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 40 YVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.5 bits (78), Expect = 0.052
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
R ++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 265 PK-RTIGGKEVDVKRATPK 318
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.5 bits (78), Expect = 0.052
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
R ++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 265 PK-RTIGGKEVDVKRATPK 318
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.5 bits (78), Expect = 0.052
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 264
R ++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 265 PK-RTIGGKEVDVKRATPK 318
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.092
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +1
Query: 100 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 279
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 280 GGKEVDVKRATPKP 321
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 34.7 bits (76), Expect = 0.092
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +1
Query: 100 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 279
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 280 GGKEVDVKRATPKP 321
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLKT 264
FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 172 FVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAEE 228
Query: 265 PKRTI--GGKEVDV 300
R I GG + +
Sbjct: 229 QDRPIRAGGSRMKI 242
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLKT 264
FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 172 FVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAEE 228
Query: 265 PKRTI--GGKEVDV 300
R I GG + +
Sbjct: 229 QDRPIRAGGSRMKI 242
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLKT 264
FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 149 FVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAEE 205
Query: 265 PKRTI--GGKEVDV 300
R I GG + +
Sbjct: 206 QDRPIRAGGSRMKI 219
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMP 180
+ FVGGL S + + +I NFFS +G L+V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.37
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 70 KHDMGRFFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQRKGFCFITFESEQVV 246
K D FVG +S + SD+ IR +E G + + K Q GFC T + E +
Sbjct: 43 KPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFT-DLEGTL 101
Query: 247 NDLLKTPKRTIGGKEVDVK 303
L + +G K++ VK
Sbjct: 102 RALRILHEFHLGDKKLTVK 120
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.37
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 70 KHDMGRFFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQRKGFCFITFESEQVV 246
K D FVG +S + SD+ IR +E G + + K Q GFC T + E +
Sbjct: 43 KPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFT-DLEGTL 101
Query: 247 NDLLKTPKRTIGGKEVDVK 303
L + +G K++ VK
Sbjct: 102 RALRILHEFHLGDKKLTVK 120
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/79 (20%), Positives = 35/79 (44%)
Frame = +1
Query: 70 KHDMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 249
+ D + ++ + ++ FFS G + +V + D + KG C++ F E+ V
Sbjct: 21 ERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVP 80
Query: 250 DLLKTPKRTIGGKEVDVKR 306
L + + G + ++R
Sbjct: 81 LGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 32.3 bits (70), Expect = 0.49
Identities = 16/79 (20%), Positives = 35/79 (44%)
Frame = +1
Query: 70 KHDMGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 249
+ D + ++ + ++ FFS G + +V + D + KG C++ F E+ V
Sbjct: 166 ERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVP 225
Query: 250 DLLKTPKRTIGGKEVDVKR 306
L + + G + ++R
Sbjct: 226 LGLALNGQRLMGAPLQIQR 244
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.65
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
+ F+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 31.9 bits (69), Expect = 0.65
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
+ F+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 31.9 bits (69), Expect = 0.65
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
+ F+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 31.9 bits (69), Expect = 0.65
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 228
+ F+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +1
Query: 79 MGRFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 258
M R ++G L + SD ++ +FF +G + +V M + GF F+ F+ ++ +D +
Sbjct: 1 MVRVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV 52
Query: 259 KTPKRTIGGKEV 294
+ GKE+
Sbjct: 53 ----HDLNGKEL 60
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 2.0
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +1
Query: 121 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 243
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 261
+ +VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 261
+ +VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 261
+ +VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 166 EVEMPFDKTKNQRKGFCFITFESEQVVNDLLK-TPKRTIGGKEVDVKRA 309
++ + D+ KGF ++TFE+EQ +N + G + + V RA
Sbjct: 40 DIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRA 88
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 272 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 159
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +1
Query: 91 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 189
+VG L S +++D I F++ G++ + ++ FD+
Sbjct: 49 YVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = +1
Query: 85 RFFVGGLSSEISDDEIRNFFSEFGT----ILEVEMPFDKTKNQRKGFCFITFESEQVVND 252
R F+G + S DEI ++ +P D K + +GFCF+ F + +D
Sbjct: 282 RLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DNEKIKNRGFCFVDFIDHKTASD 340
Query: 253 L 255
+
Sbjct: 341 I 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,663,129
Number of Sequences: 27780
Number of extensions: 185401
Number of successful extensions: 568
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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