Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_F10
         (873 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.      25   2.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.3  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   7.0  

>AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.
          Length = 110

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +1

Query: 553 ILATKQLKDWFVNKWCEFIYIRQTNHTKAFLLANIILGCIFFIGKYVNGYMLIYSMCLFV 732
           I+A K+ + W+    C   ++ +  HT    L+   + C     K +N   L+Y      
Sbjct: 36  IIAPKRYEAWYCAGECMISFLPKYEHTHVMQLSTSAIPCC--SPKKMNSIRLLY-----F 88

Query: 733 CLSHKVIYPVI 765
            +S+ VIY  I
Sbjct: 89  DMSYNVIYSTI 99


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 669  HFLHWKVCKWLHANIFNVFV 728
            H LHW+  K L  N+ N+ V
Sbjct: 2669 HILHWREMKALLTNVQNLIV 2688


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 626 LVCLI*MNSHHLFTNQSFNCFVANIIFFPLY 534
           L+C+  +  HH   N   N  V  I FF LY
Sbjct: 439 LMCISFLQQHHQKPNACSNLGVLLIEFFELY 469


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 834,599
Number of Sequences: 2352
Number of extensions: 17190
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)