Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_F10
         (873 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77135-1|CAB00876.1|  362|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U55363-2|AAA97961.3|  357|Caenorhabditis elegans Serpentine rece...    29   5.7  
AC090999-24|AAK26151.1|  502|Caenorhabditis elegans Hypothetical...    29   5.7  
Z81066-1|CAB02970.1|  919|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AF125952-5|AAD14697.2|  327|Caenorhabditis elegans Serpentine re...    28   7.6  
AC006722-11|AAW88389.1|  327|Caenorhabditis elegans Serpentine r...    28   7.6  

>Z77135-1|CAB00876.1|  362|Caenorhabditis elegans Hypothetical
           protein T16A9.2 protein.
          Length = 362

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +1

Query: 655 IILGCIFFIGKYVNGYMLIYSMCLF 729
           I++   F IG+ V+G++L  S+CLF
Sbjct: 270 ILINAFFGIGREVHGHILTVSICLF 294


>U55363-2|AAA97961.3|  357|Caenorhabditis elegans Serpentine
           receptor, class h protein28 protein.
          Length = 357

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -2

Query: 554 IIFFPLYVESLSKHAVLCLYFNQASNPSKQSNVMHRHI-INFIKFIWWYTHTKNITLLII 378
           I+  P+Y+E      + CLYF+        ++V+  H+ +NFI  I+ +   + + +L +
Sbjct: 35  ILTIPIYIEG-----IYCLYFSTDQLQQHYTSVLKNHVFLNFIGEIFGFYLMRPVVILPV 89

Query: 377 I 375
           +
Sbjct: 90  V 90


>AC090999-24|AAK26151.1|  502|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.1 protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 499 KHRTACLERLSTYNGKKIILATKQLKDWFVNKW 597
           K R ACLER    NG +I  +   LK W + K+
Sbjct: 433 KSRGACLERFKVENGGQISCSQCDLKFWEILKF 465


>Z81066-1|CAB02970.1|  919|Caenorhabditis elegans Hypothetical
           protein F17B5.2 protein.
          Length = 919

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
 Frame = -2

Query: 443 IINFIKFIWWYTHTK--NITLL---------IIINDTDSQICFHRIISSNKPIKAGNITY 297
           +I+F  F  WY H    NI +L         I+IN  D     H   +SN+ I   N+T 
Sbjct: 345 VISFEGFEKWYLHLSLTNIGVLVVTLFLLNVIVINKDDILDRVHLRTNSNRDIVTSNMTV 404

Query: 296 D*FVRFSWHFANLAHANLFFNEANITNRLNS 204
           D  +R ++ +    + N +          NS
Sbjct: 405 DDAIRLNYQWTVRDYVNFYTPTCKYAGTKNS 435


>AF125952-5|AAD14697.2|  327|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 61 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = -2

Query: 605 NSHHLFTNQSFNCFVANIIFFPLYVESLSKHAVLCLYFNQASNPSKQSNVMHRHII 438
           NSHH   N +   +  N I+FP+      + A+  L  + ++  SK + VM   ++
Sbjct: 181 NSHHFCMNFNTAIYAFNTIYFPIIGNYWKRIAMKILKSSISTASSKSTRVMSELLV 236


>AC006722-11|AAW88389.1|  327|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 75 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = -2

Query: 605 NSHHLFTNQSFNCFVANIIFFPLYVESLSKHAVLCLYFNQASNPSKQSNVMHRHII 438
           NSHH   N +   +  N I+FP+      + A+  L  + ++  SK + VM   ++
Sbjct: 181 NSHHFCMNFNTAIYAFNTIYFPIIGNYWKRIAMKILKSSISTASSKSTRVMSELLV 236


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,078,474
Number of Sequences: 27780
Number of extensions: 386663
Number of successful extensions: 877
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)