Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_F03
         (865 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY748834-1|AAV28182.1|  171|Anopheles gambiae cytochrome P450 pr...    24   6.9  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   9.1  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   9.1  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   9.1  

>AY748834-1|AAV28182.1|  171|Anopheles gambiae cytochrome P450
           protein.
          Length = 171

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 151 NLKMEKTTPIVAAAAGSVRKKMANRIGRGVPEVTDAYS 264
           +L++    P++A  A    + +A RI RG     D Y+
Sbjct: 48  SLRLFPPVPVIARIATEDTELLAERITRGTSVAIDIYT 85


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 416 TDEWHFGHSEMSNRKVTRGCCWHFNRIRPLQ 324
           T+ WH  HS    R +   C   ++RI  L+
Sbjct: 537 TNRWHHFHSHTPQRSLCPYCPASYSRIDTLR 567


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 416 TDEWHFGHSEMSNRKVTRGCCWHFNRIRPLQ 324
           T+ WH  HS    R +   C   ++RI  L+
Sbjct: 513 TNRWHHFHSHTPQRSLCPYCPASYSRIDTLR 543


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 7/30 (23%), Positives = 19/30 (63%)
 Frame = -1

Query: 775 ITWVLCEMLSTKYTNILRYCLVRXNKLPSN 686
           + W + + L+    N++RY +++ ++L S+
Sbjct: 180 LNWRVSDALTLSDHNVVRYAIIQGHRLTSS 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,334
Number of Sequences: 2352
Number of extensions: 16075
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)