Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_F02
         (869 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL591069-1|CAI16539.1|  556|Homo sapiens solute carrier family 2...    34   0.77 
AL355506-1|CAI20340.1|  556|Homo sapiens solute carrier family 2...    34   0.77 
AJ403946-1|CAC39443.1|  557|Homo sapiens organic cation transpor...    34   0.77 
AJ001417-1|CAA04751.1|  556|Homo sapiens extraneuronal monoamine...    34   0.77 
BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.        32   3.1  
BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.        32   3.1  
AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.       32   3.1  
AJ251884-1|CAB96132.1|  143|Homo sapiens extraneuronal monoamine...    31   4.1  

>AL591069-1|CAI16539.1|  556|Homo sapiens solute carrier family 22
           (extraneuronal monoamined) (PLP2) pseudogene protein.
          Length = 556

 Score = 33.9 bits (74), Expect = 0.77
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +3

Query: 639 ALSCSDPAAYRIPVR---LSPXREAWRFLIAHAVCVSQF 746
           ALSC+DP A   P R   L P R  WR+  AH+  VS+F
Sbjct: 107 ALSCADPLA-AFPNRSAPLVPCRGGWRYAQAHSTIVSEF 144


>AL355506-1|CAI20340.1|  556|Homo sapiens solute carrier family 22
           (extraneuronal monoaminen 1 protein.
          Length = 556

 Score = 33.9 bits (74), Expect = 0.77
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +3

Query: 639 ALSCSDPAAYRIPVR---LSPXREAWRFLIAHAVCVSQF 746
           ALSC+DP A   P R   L P R  WR+  AH+  VS+F
Sbjct: 107 ALSCADPLA-AFPNRSAPLVPCRGGWRYAQAHSTIVSEF 144


>AJ403946-1|CAC39443.1|  557|Homo sapiens organic cation transporter
           3 protein.
          Length = 557

 Score = 33.9 bits (74), Expect = 0.77
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +3

Query: 639 ALSCSDPAAYRIPVR---LSPXREAWRFLIAHAVCVSQF 746
           ALSC+DP A   P R   L P R  WR+  AH+  VS+F
Sbjct: 107 ALSCADPLA-AFPNRSAPLVPCRGGWRYAQAHSTIVSEF 144


>AJ001417-1|CAA04751.1|  556|Homo sapiens extraneuronal monoamine
           transporter protein.
          Length = 556

 Score = 33.9 bits (74), Expect = 0.77
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +3

Query: 639 ALSCSDPAAYRIPVR---LSPXREAWRFLIAHAVCVSQF 746
           ALSC+DP A   P R   L P R  WR+  AH+  VS+F
Sbjct: 107 ALSCADPLA-AFPNRSAPLVPCRGGWRYAQAHSTIVSEF 144


>BC064495-1|AAH64495.1|  299|Homo sapiens RCOR1 protein protein.
          Length = 299

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -3

Query: 690 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 562
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>BC051003-1|AAH51003.1|  293|Homo sapiens RCOR1 protein protein.
          Length = 293

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -3

Query: 690 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 562
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>AF155595-1|AAF01498.1|  482|Homo sapiens CoREST protein protein.
          Length = 482

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -3

Query: 690 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 562
           EKG +VSGKR+GRN  A   ++      +  +C  SP  T AS
Sbjct: 3   EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44


>AJ251884-1|CAB96132.1|  143|Homo sapiens extraneuronal monoamine
           transporter (EMT) protein.
          Length = 143

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = +3

Query: 639 ALSCSDPAAYRIPVR---LSPXREAWRFLIAHAVCVSQ 743
           ALSC+DP A   P R   L P R  WR+  AH+  VS+
Sbjct: 107 ALSCADPLA-AFPNRSAPLVPCRGGWRYAQAHSTIVSE 143


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,225,929
Number of Sequences: 237096
Number of extensions: 2558257
Number of successful extensions: 6857
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6856
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)