Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_F01
         (853 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.67 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   2.7  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          23   2.7  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   4.7  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   6.2  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   8.2  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.4 bits (53), Expect = 0.67
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 737 QLYHVWKHFLPQPFCSSFNLSQTF 666
           ++Y++W HF P  F  +F + Q+F
Sbjct: 110 EIYYIWSHF-PYVFGEAFCIIQSF 132


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 15/69 (21%), Positives = 33/69 (47%)
 Frame = +1

Query: 109 VVHLERSQWLPRKTRLLSFLEANAKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQ 288
           V+ ++  Q++PR   LL ++  +        ++    IK + +    RPD +  L    +
Sbjct: 220 VMRMKLKQFMPRLYDLLGYVMPDRTFAPFFTRVVTDTIKYRNDNNIVRPDFINMLMELQK 279

Query: 289 NELPKKIKS 315
           N  P+K+++
Sbjct: 280 N--PQKLEN 286


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 819 PRCSRTVVGSFPNNCGXSPIQCCASRG 739
           P+  R++ GS+ ++ G SP+   +S G
Sbjct: 57  PQPPRSLEGSYDSSSGDSPVSSHSSNG 83


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +1

Query: 202 KLYPQAIKLKAERKTKRPDELIKLDNWYQNEL 297
           +++  A  +KA     R  EL K+D W+ +++
Sbjct: 253 RMFVLAASIKAGYTIDRLYELTKIDKWFLHKM 284


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 427 PRAVMQETKKAFRKLPNIES 486
           PR++   TKK F K  +I++
Sbjct: 85  PRSMQDSTKKLFNKCKSIQN 104


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 184 LLHLPPRKKVDVSFVVAIVNVLNVQH 107
           L  + PRKK       A+ NV+ +QH
Sbjct: 438 LSDVTPRKKYPFELEKALHNVMFIQH 463


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,423
Number of Sequences: 438
Number of extensions: 5124
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)