Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_E22
(949 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 41 2e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 41 3e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.015
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.059
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.078
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.24
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 31 0.24
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 31 0.31
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 0.36
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.55
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 0.96
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 2.2
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 26 8.9
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 26 8.9
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 8.9
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 41.1 bits (92), Expect = 2e-04
Identities = 26/89 (29%), Positives = 30/89 (33%)
Frame = +2
Query: 602 VXTRXXAXLHPXRXPXRXSPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXS 781
V T A L + S K+ P P + P P PP P+ P P S
Sbjct: 1000 VSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP--PVPKSSS 1057
Query: 782 GXPXRPPPPPXXGXPASPXPPXXXXPPTP 868
G P PPP P P PP P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 34.7 bits (76), Expect = 0.019
Identities = 26/97 (26%), Positives = 31/97 (31%)
Frame = +2
Query: 656 SPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPPXXGXPASP 835
SP S P P PP P + P PA + P P + PP P A P
Sbjct: 981 SPTSEP-PKDHPPSAPLSKPVSTSPAAPLARVPPVPK------LSSKAPPVPLPSADAPP 1033
Query: 836 XPPXXXXPPTPXX*RPXRXPXLXLWGPQETTTXPSPA 946
P PP P P P P+P+
Sbjct: 1034 IPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
Score = 34.3 bits (75), Expect = 0.025
Identities = 23/80 (28%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Frame = +2
Query: 632 PXRXPXRXSPKSTPXPXXAPP-HRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPP 808
P P P S P P APP P P P+ P+ P PP
Sbjct: 1065 PVPAPSSEIP-SIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV 1123
Query: 809 PXXGXPASPXPPXXXXPPTP 868
P A P P PP P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVP 1143
Score = 34.3 bits (75), Expect = 0.025
Identities = 23/69 (33%), Positives = 25/69 (36%), Gaps = 3/69 (4%)
Frame = +2
Query: 671 PXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGX---PXRPPPPPXXGXPASPXP 841
P P A P PK + PP PS AP P + P PP P A P P
Sbjct: 1095 PKPSVAAPPVPKPS-VAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Query: 842 PXXXXPPTP 868
PP P
Sbjct: 1154 APSGAPPVP 1162
Score = 32.7 bits (71), Expect = 0.078
Identities = 22/81 (27%), Positives = 28/81 (34%), Gaps = 6/81 (7%)
Frame = +2
Query: 644 PXRXSPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRP-----PPP 808
P + P P PP ++ P P+ + P+ SG P P PP
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV 1094
Query: 809 PXXGXPASPXP-PXXXXPPTP 868
P A P P P PP P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVP 1115
Score = 32.7 bits (71), Expect = 0.078
Identities = 25/70 (35%), Positives = 26/70 (37%), Gaps = 4/70 (5%)
Frame = +2
Query: 671 PXPXXAPPHRPKNTPXRXPPAXXPSXAPRXP---TRXRXSGXPXRPPPPPXXGXPASPXP 841
P P APP PK + PP PS AP P P PP P A P P
Sbjct: 1115 PAPSGAPPV-PKPS-VAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Query: 842 -PXXXXPPTP 868
P PP P
Sbjct: 1173 APSSGIPPVP 1182
Score = 31.9 bits (69), Expect = 0.14
Identities = 27/84 (32%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Frame = +2
Query: 632 PXRXPXRXSPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPP- 808
P P +P P P APP PK + PP PS P +G P PPP
Sbjct: 1141 PVPKPSVAAPP-VPAPSGAPPV-PKPS-VAAPPVPAPSSGI-PPVPKPAAGVPPVPPPSE 1196
Query: 809 ----PXXGXPASPXPPXXXXPPTP 868
P P PP PP P
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 30.3 bits (65), Expect = 0.41
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 840 PXPXXGPPLXXXSGXPAPQXSXSGVXRKPPPXQAP 944
P P PP+ + P S SG PPP AP
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +2
Query: 740 PSXAPRXPTRXRXSGXPXRPPPPPXXGXPASP--XPPXXXXPPTP 868
PS R + R + P PPP P +SP PP P P
Sbjct: 951 PSNDGRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAP 995
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 40.7 bits (91), Expect = 3e-04
Identities = 29/85 (34%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +2
Query: 611 RXXAXLHPXRXPXRXSPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXP 790
R L P R S P P PP P + P PP+ P AP P + P
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSL-PMGAPAAPPLPPSA--P 454
Query: 791 XRPPPPPXXGXPAS-PXPPXXXXPP 862
PP P G PA+ P PP PP
Sbjct: 455 IAPPLPA--GMPAAPPLPPAAPAPP 477
Score = 37.1 bits (82), Expect = 0.004
Identities = 25/101 (24%), Positives = 30/101 (29%)
Frame = +2
Query: 644 PXRXSPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPPXXGX 823
P P+S P PP + PPA P+ R G R PP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 824 PASPXPPXXXXPPTPXX*RPXRXPXLXLWGPQETTTXPSPA 946
P+ P PP+ P P P P PA
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPA 461
Score = 35.9 bits (79), Expect = 0.008
Identities = 23/88 (26%), Positives = 29/88 (32%)
Frame = +2
Query: 632 PXRXPXRXSPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPP 811
P P R +P + P R + P PPA AP P S P P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 812 XXGXPASPXPPXXXXPPTPXX*RPXRXP 895
P++P PP+ P P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 33.1 bits (72), Expect = 0.059
Identities = 19/71 (26%), Positives = 22/71 (30%)
Frame = +2
Query: 656 SPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPPXXGXPASP 835
+P ST P P P R P P+ P P P PP P +P
Sbjct: 223 TPTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNP 282
Query: 836 XPPXXXXPPTP 868
PP P
Sbjct: 283 AINSTSKPPLP 293
Score = 31.9 bits (69), Expect = 0.14
Identities = 19/70 (27%), Positives = 22/70 (31%)
Frame = +2
Query: 659 PKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPPXXGXPASPX 838
P S+ A K P PP+ P S P PPPP + P
Sbjct: 294 PPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPL 353
Query: 839 PPXXXXPPTP 868
PP P P
Sbjct: 354 PPQGRSAPPP 363
Score = 30.7 bits (66), Expect = 0.31
Identities = 23/87 (26%), Positives = 29/87 (33%), Gaps = 3/87 (3%)
Frame = +2
Query: 644 PXRXSPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXP--TRXRXSGXPXRPPPP-PX 814
P P+S P + ++ P PP PS + P + R P PPP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 815 XGXPASPXPPXXXXPPTPXX*RPXRXP 895
PA P TP P P
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLP 424
Score = 27.1 bits (57), Expect = 3.9
Identities = 24/98 (24%), Positives = 26/98 (26%), Gaps = 3/98 (3%)
Frame = +2
Query: 659 PKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPPXXG---XPA 829
P S P P P PP PS P PPPP P
Sbjct: 268 PNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPI 327
Query: 830 SPXPPXXXXPPTPXX*RPXRXPXLXLWGPQETTTXPSP 943
PP P R + L PQ + P P
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAGSIPL-PPQGRSAPPPP 364
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.1 bits (77), Expect = 0.015
Identities = 23/82 (28%), Positives = 29/82 (35%)
Frame = +2
Query: 695 HRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPPXXGXPASPXPPXXXXPPTPXX 874
H K++ PP+ P+ R S P PPP PAS P PP P
Sbjct: 114 HIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPS---PASAPPIPSKAPPIPSS 170
Query: 875 *RPXRXPXLXLWGPQETTTXPS 940
P P + P + PS
Sbjct: 171 LPPPAQPAAPVKSPPSAPSLPS 192
Score = 30.7 bits (66), Expect = 0.31
Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Frame = +2
Query: 650 RXSPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRP--PPPPXXGX 823
R + P P PP +P PP PS AP P+ P P PP
Sbjct: 138 RPPTSAPPRPSIPPP-----SPASAPP--IPSKAPPIPSSLPPPAQPAAPVKSPPSAPSL 190
Query: 824 PASPXPPXXXXPPTP 868
P++ P PP P
Sbjct: 191 PSAVPPMPPKVPPPP 205
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Frame = +2
Query: 650 RXSPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPP-PPXXGXP 826
+ S + P APP + R P + P + P+ P + PP P P
Sbjct: 117 KSSASAAPPSAPAPP--TPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Query: 827 ASPXPPXXXXPPTP 868
A P P P P
Sbjct: 175 AQPAAPVKSPPSAP 188
Score = 27.9 bits (59), Expect = 2.2
Identities = 26/103 (25%), Positives = 31/103 (30%), Gaps = 1/103 (0%)
Frame = +2
Query: 632 PXRXPXRXS-PKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPP 808
P P R S P +P P + P PP P+ + P P PP
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP--PSAPSLPSAVPPM 197
Query: 809 PXXGXPASPXPPXXXXPPTPXX*RPXRXPXLXLWGPQETTTXP 937
P P P PP P RP P T+ P
Sbjct: 198 P----PKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESP 236
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.059
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2
Query: 686 APPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPPXXGXPASPXPP 844
AP H P R A P + P S P PP G P++P PP
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +2
Query: 713 PXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPPXXGXPASPXPPXXXXPPTP 868
P PP S AP + P PPPP P PP PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPS-APPMPAGPPSAPPPPLP 1736
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/70 (27%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Frame = +2
Query: 656 SPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXR--PPPPPXXGXPA 829
+P S P P P P P+ PS A + P+ + P PP
Sbjct: 1471 APSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVP 1530
Query: 830 SPXPPXXXXP 859
SP PP P
Sbjct: 1531 SPAPPAPQHP 1540
Score = 30.3 bits (65), Expect = 0.41
Identities = 22/75 (29%), Positives = 25/75 (33%), Gaps = 1/75 (1%)
Frame = +2
Query: 620 AXLHPXRXPXRXSPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRP 799
A HP P + P AP P PP+ P A G P P
Sbjct: 1682 APAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPA----------GPPSAP 1731
Query: 800 PPP-PXXGXPASPXP 841
PPP P P+ P P
Sbjct: 1732 PPPLPASSAPSVPNP 1746
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +2
Query: 692 PHRPKN-TPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPPXXGXPASPXPPXXXXPPTP 868
P P N P PPA + AP P P P P S PP P P
Sbjct: 1436 PGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVP 1495
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.078
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 701 PKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPPXXGXPASPXPP 844
P P P P+ P P G P PPPP G P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 32.3 bits (70), Expect = 0.10
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +2
Query: 704 KNTPXRXPPAXXPSXAPRX---PTRXRXSGXPXRPPPPPXXGXPASPXPPXXXXPP 862
K+ P P P+ AP P G P PPPPP G + PP PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGP--PPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +2
Query: 656 SPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGX-PXRPPPPP 811
SP P P P P PPA P P +G P PPPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPV-PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 797 PPPPPXXGXPASPXPPXXXXPPTPXX*RPXRXP 895
PPPPP P P PP P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -3
Query: 452 PXARPXXXPPPPAXVGPXXXGXXXPPTPP 366
P P PPP P G PP PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 428 PPPPAXVGPXXXGXXXPPTPP 366
PPPP G G PP PP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP 782
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.24
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 782 GXPXRPPPPPXXGXPASPXPP 844
G P PPPPP P+ P PP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPP 27
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 788 PXRPPPPPXXGXPASPXPPXXXXPPTP 868
P PPPPP P PP PP P
Sbjct: 6 PGNPPPPP---PPPGFEPPSQPPPPPP 29
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 31.1 bits (67), Expect = 0.24
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Frame = +2
Query: 665 STPXPXXAPPHRPKNTPXRXPPAXXPSXAP--RXPTRXRXSGXPXRPPPPPXXGXPAS 832
S+P P NTP PP+ S P + T S PPPPP P S
Sbjct: 195 SSPNPAEHMTGAYVNTPLNQPPSYAASTQPEFQQTTSPIFSSSSTPPPPPPRPSQPTS 252
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +2
Query: 701 PKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPPXXGXPASPXPP 844
P T PA P P PT PPPPP + PP
Sbjct: 712 PMGTGAVNSPAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect(2) = 0.36
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +2
Query: 686 APPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPP 811
AP N+ PP+ P A T P PPPPP
Sbjct: 155 APTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 21.0 bits (42), Expect(2) = 0.36
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 788 PXRPPPPPXXGXPAS 832
P PPPPP P S
Sbjct: 236 PAPPPPPPPTLPPQS 250
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.55
Identities = 21/50 (42%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 414 RGGRRXXXGARXGXXPHTXGARGRXGXGSGXXPTXGRGG--GGXXTHGXA 557
RGGR G R G G RG G G G GRGG GG G A
Sbjct: 8 RGGRGGSRGGRGGF----NGGRGGFGGGRGGARGGGRGGARGGRGGRGGA 53
Score = 27.5 bits (58), Expect = 2.9
Identities = 21/60 (35%), Positives = 22/60 (36%)
Frame = +3
Query: 414 RGGRRXXXGARXGXXPHTXGARGRXGXGSGXXPTXGRGGGGXXTHGXAHXSPXERXAXXG 593
RGGR G R G GARG G+ GRGG G G S A G
Sbjct: 15 RGGRGGFNGGRGGFGGGRGGARGGGRGGA----RGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.1 bits (62), Expect = 0.96
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Frame = +2
Query: 689 PPHRPKNTPXRXPPAXXPSXA--PRXPTRXRX--SGXPXRPPPPPXXG-XPASPXPPXXX 853
PP P P PP+ P+ A P P SG P P P P G A P
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTGKETAVPLSSMPN 1942
Query: 854 XPPT 865
PP+
Sbjct: 1943 APPS 1946
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 2.2
Identities = 26/88 (29%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Frame = +2
Query: 620 AXLHPXRXPXRXSP---KSTPXPXXAPPHR--PKNTPXRXPPAXXPSXAPRXPTRXRXSG 784
A +HP P + P P R P P R P S P +R S
Sbjct: 846 ADVHPLPPPSTSTTAGWNDAPMLGQLPMRRAAPSMAPVRSPFPGASSAQPAAMSRT--SS 903
Query: 785 XPXRPPPPPXXGXPASPXPPXXXXPPTP 868
PPPPP AS P PP P
Sbjct: 904 VSTLPPPPPTASMTAS--APAIASPPPP 929
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +2
Query: 707 NTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPPXXGXPASPXPP 844
N P P +P+ PT R S P P G P P P
Sbjct: 418 NQPNYANLTPTPQVSPKRPTYSRSSPLPSASVPALGDGSPDPPAAP 463
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = +2
Query: 668 TPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPT 766
TP P P +PK + P+ P P P+
Sbjct: 427 TPKPEAQPVSKPKESAEEQKPSKEPEVKPTTPS 459
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 8.9
Identities = 17/63 (26%), Positives = 21/63 (33%)
Frame = +2
Query: 656 SPKSTPXPXXAPPHRPKNTPXRXPPAXXPSXAPRXPTRXRXSGXPXRPPPPPXXGXPASP 835
S S P + P +P P P PS R +R PPPP +
Sbjct: 93 SKPSYSQPSYSQPSQPPKEPA-LPSRGTPSLPSRPGSRPSVLNQEQVPPPPVRPNVMSQM 151
Query: 836 XPP 844
PP
Sbjct: 152 PPP 154
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,798,067
Number of Sequences: 5004
Number of extensions: 19546
Number of successful extensions: 210
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 483319012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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