Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_E21
         (872 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0344 - 16590803-16591433,16591598-16591914,16592300-165923...    33   0.23 
08_01_0038 - 282431-283954                                             33   0.39 
06_01_0971 + 7498971-7499477,7499578-7499715,7500653-7500732,750...    30   2.1  
01_01_0441 - 3305319-3305894                                           29   4.9  

>11_04_0344 -
           16590803-16591433,16591598-16591914,16592300-16592395,
           16592505-16592540
          Length = 359

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1

Query: 806 GILHFLPIFAPSPLTAINLAGSNHPQLHGNFY 711
           G+  +L +FAP+P   + L G ++P   GN+Y
Sbjct: 172 GVAAYLVLFAPTPRDVLVLVGESYPFFRGNYY 203


>08_01_0038 - 282431-283954
          Length = 507

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 26/96 (27%), Positives = 43/96 (44%)
 Frame = +2

Query: 407 TLKMDNLYTKGELLQVHTKNYDVFEGRFYSMAQDKTKISLYDVKEIPHGDANDGVLHYYD 586
           TL + +  T   +L+ H +   VF  R Y+   D       DV   P+GD        Y 
Sbjct: 82  TLVVSSARTAQAILRTHDR---VFASRPYNTIADILLYGATDVAFSPYGD--------YW 130

Query: 587 SEIREVVKLQQSTEKKVLKISQTKYEEILKISKKYI 694
            +I+++V +   T KKV    QT+ +E+  +  K +
Sbjct: 131 RQIKKIVTMNLLTIKKVHSYGQTRQQEVRLVMAKIV 166


>06_01_0971 +
           7498971-7499477,7499578-7499715,7500653-7500732,
           7501175-7501584,7503650-7503834,7504280-7504365,
           7504641-7504774,7506491-7506790,7506999-7507147,
           7507762-7507845
          Length = 690

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = -3

Query: 777 TITANSNKSCWF--KSSTASWKLLSTWFMKMYFFDILRISSYFV--CDILRTFFSVDCWS 610
           T TA+S  SC F  +++  +WK+  TW+M  +F   +  S      C +L +  +  C  
Sbjct: 570 TFTASSKFSCVFFEQNTRETWKVRCTWWMNRHFSQSICTSETLTGDCKLLASKAACACHL 629

Query: 609 F 607
           F
Sbjct: 630 F 630


>01_01_0441 - 3305319-3305894
          Length = 191

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 215 HEEGKYWHDYNYHAVFYYRSKHLKIWQLICAP 120
           H+EGK W D++Y+ V  Y +  L     IC P
Sbjct: 159 HDEGKRWADHDYYNVM-YATGPLAFRPAICPP 189


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,316,550
Number of Sequences: 37544
Number of extensions: 386053
Number of successful extensions: 876
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)