Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_E21
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32683-14|CAN86606.1|  102|Caenorhabditis elegans Hypothetical p...    33   0.27 
AL117207-12|CAD88220.1|  324|Caenorhabditis elegans Hypothetical...    30   1.9  
Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical p...    28   7.6  
Z68159-5|CAA92288.2|  472|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu...    28   7.6  
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.      28   7.6  

>Z32683-14|CAN86606.1|  102|Caenorhabditis elegans Hypothetical
           protein R07E5.10b protein.
          Length = 102

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 16/74 (21%), Positives = 34/74 (45%)
 Frame = +3

Query: 156 RTVIKYCMVIIIVPVLSFFVAKSILFDGVLRLDPINXXXXXXXXXXXXXXXXXXXYIFKA 335
           + ++ Y +VI+IVP+ S F+ K   F+G+L +   +                   ++F A
Sbjct: 29  KNLLTYSLVILIVPLASMFLLKQFFFEGLLGVSANDALTYSAIIAVVLVHVVLGIWLFAA 88

Query: 336 YSETEKDPKPVKKD 377
             + ++  +  K+D
Sbjct: 89  TKQEDRKKRENKQD 102


>AL117207-12|CAD88220.1|  324|Caenorhabditis elegans Hypothetical
           protein Y60A3A.22 protein.
          Length = 324

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = +3

Query: 390 HYCFISHSKWTTSTQKENCYKFTQK-TTTSLKVDSIVWPKIRPKYHYMMSRKFHMVMLMM 566
           HYC I+   W     +     F +K  T ++ +D  V PK  P + Y+M+  F  +  + 
Sbjct: 92  HYCLINVGVWAYLEMESLLLCFFKKHQTIAVIIDVHVIPKFIPYFCYLMAIVFPAIPCVG 151

Query: 567 ESFITM 584
             F+T+
Sbjct: 152 LDFLTV 157


>Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical protein
            C38D9.5 protein.
          Length = 1213

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = +3

Query: 495  VWPKIRPKYHYMMSRKFHMVMLMMESFITMILK*EKW*NSSSLLKRKFSKYRKRNMKKSS 674
            VW +  PK+ +M + KF   +L  +     +LK EK+  + S LK K +  ++     S 
Sbjct: 1129 VWLE-NPKFFFMSTDKFTHFLLGFKITTENVLKYEKYGKNRSALKNKKTLTKEDESTSSQ 1187

Query: 675  KYQKNT 692
                NT
Sbjct: 1188 PELSNT 1193


>Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical
            protein C38D9.5 protein.
          Length = 1213

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = +3

Query: 495  VWPKIRPKYHYMMSRKFHMVMLMMESFITMILK*EKW*NSSSLLKRKFSKYRKRNMKKSS 674
            VW +  PK+ +M + KF   +L  +     +LK EK+  + S LK K +  ++     S 
Sbjct: 1129 VWLE-NPKFFFMSTDKFTHFLLGFKITTENVLKYEKYGKNRSALKNKKTLTKEDESTSSQ 1187

Query: 675  KYQKNT 692
                NT
Sbjct: 1188 PELSNT 1193


>Z68159-5|CAA92288.2|  472|Caenorhabditis elegans Hypothetical
           protein C33D9.5 protein.
          Length = 472

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 557 ANDGVLHYYDSEIREVVKLQQSTEKKVLKISQTKYEEILKISKK 688
           AND +  Y  SE   + KL +  + ++LK  + K +E+ +  KK
Sbjct: 268 ANDNMEKYKSSESERIQKLLEEQKAEILKEEEIKRKELSEQIKK 311


>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
            guidance protein 2,isoform a protein.
          Length = 2886

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 687  FFDILRISSYFVCDILRTFFSVDCWSFTTSLI 592
            FF+   +    VCDI+RT  SVD WS + +L+
Sbjct: 1599 FFNKSEVGLLLVCDIIRTRCSVD-WSESMALL 1629


>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
          Length = 2914

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 687  FFDILRISSYFVCDILRTFFSVDCWSFTTSLI 592
            FF+   +    VCDI+RT  SVD WS + +L+
Sbjct: 1627 FFNKSEVGLLLVCDIIRTRCSVD-WSESMALL 1657


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,500,975
Number of Sequences: 27780
Number of extensions: 375623
Number of successful extensions: 1050
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)