Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_E17
         (877 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003239-1|AAO24996.1|  312|Drosophila melanogaster LD48066p pro...    68   2e-11
AY051411-1|AAK92835.1|  751|Drosophila melanogaster GH09153p pro...    68   2e-11
AE014297-3430|AAF56217.1|  751|Drosophila melanogaster CG13604-P...    68   2e-11
AE014296-2198|AAF49875.3| 1988|Drosophila melanogaster CG11008-P...    29   6.4  

>BT003239-1|AAO24996.1|  312|Drosophila melanogaster LD48066p
           protein.
          Length = 312

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +1

Query: 430 SKSRRWVFALRHGERVDLTYGPWVPHCF-ENDTYVRKDLNLPLKLAHRAGGKGGYVKDTP 606
           +K+R+ ++ +RHGERVD T+G W+P+CF E   Y+RKDLN+P  L  R     G+  D+P
Sbjct: 50  AKNRK-IYIMRHGERVDFTFGTWIPYCFDEFGNYMRKDLNMPKTLPRRKNSPEGWQNDSP 108

Query: 607 XDQTG 621
               G
Sbjct: 109 LTNVG 113



 Score = 37.1 bits (82), Expect = 0.032
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 627 FQAXLVGEGMXMAGVSIKHVYASPALXCVET 719
           +QA L+G+ +  A V I HVY SP+  C++T
Sbjct: 115 YQANLIGQALLEAQVQIDHVYCSPSYRCIQT 145


>AY051411-1|AAK92835.1|  751|Drosophila melanogaster GH09153p
           protein.
          Length = 751

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +1

Query: 430 SKSRRWVFALRHGERVDLTYGPWVPHCF-ENDTYVRKDLNLPLKLAHRAGGKGGYVKDTP 606
           +K+R+ ++ +RHGERVD T+G W+P+CF E   Y+RKDLN+P  L  R     G+  D+P
Sbjct: 489 AKNRK-IYIMRHGERVDFTFGTWIPYCFDEFGNYMRKDLNMPKTLPRRKNSPEGWQNDSP 547

Query: 607 XDQTG 621
               G
Sbjct: 548 LTNVG 552



 Score = 39.9 bits (89), Expect = 0.005
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
 Frame = +1

Query: 97  GYLPAVYTRRTAETDAWTLLKAVSLGNNCSD--CKSESGSNTDSEMAGTYPHEDAADLAY 270
           G+LP  YT RTAE+DAWTL + V L  + +     +E     D     T P +D  + A+
Sbjct: 324 GHLPVNYTERTAESDAWTLHRVVQLSKSVASSLTSAEDLDIVDGRSISTEP-DDRQNTAH 382

Query: 271 ------KKSEETYQEWDKYWSEVM 324
                    EE+ Q  +KY  + +
Sbjct: 383 PDIIEGSSFEESEQSVEKYLRQTL 406



 Score = 37.1 bits (82), Expect = 0.032
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 627 FQAXLVGEGMXMAGVSIKHVYASPALXCVET 719
           +QA L+G+ +  A V I HVY SP+  C++T
Sbjct: 554 YQANLIGQALLEAQVQIDHVYCSPSYRCIQT 584


>AE014297-3430|AAF56217.1|  751|Drosophila melanogaster CG13604-PA
           protein.
          Length = 751

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +1

Query: 430 SKSRRWVFALRHGERVDLTYGPWVPHCF-ENDTYVRKDLNLPLKLAHRAGGKGGYVKDTP 606
           +K+R+ ++ +RHGERVD T+G W+P+CF E   Y+RKDLN+P  L  R     G+  D+P
Sbjct: 489 AKNRK-IYIMRHGERVDFTFGTWIPYCFDEFGNYMRKDLNMPKTLPRRKNSPEGWQNDSP 547

Query: 607 XDQTG 621
               G
Sbjct: 548 LTNVG 552



 Score = 39.9 bits (89), Expect = 0.005
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
 Frame = +1

Query: 97  GYLPAVYTRRTAETDAWTLLKAVSLGNNCSD--CKSESGSNTDSEMAGTYPHEDAADLAY 270
           G+LP  YT RTAE+DAWTL + V L  + +     +E     D     T P +D  + A+
Sbjct: 324 GHLPVNYTERTAESDAWTLHRVVQLSKSVASSLTSAEDLDIVDGRSISTEP-DDRQNTAH 382

Query: 271 ------KKSEETYQEWDKYWSEVM 324
                    EE+ Q  +KY  + +
Sbjct: 383 PDIIEGSSFEESEQSVEKYLRQTL 406



 Score = 37.1 bits (82), Expect = 0.032
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +3

Query: 627 FQAXLVGEGMXMAGVSIKHVYASPALXCVET 719
           +QA L+G+ +  A V I HVY SP+  C++T
Sbjct: 554 YQANLIGQALLEAQVQIDHVYCSPSYRCIQT 584


>AE014296-2198|AAF49875.3| 1988|Drosophila melanogaster CG11008-PA
            protein.
          Length = 1988

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 22/83 (26%), Positives = 35/83 (42%)
 Frame = +1

Query: 190  CKSESGSNTDSEMAGTYPHEDAADLAYKKSEETYQEWDKYWSEVMNSRSDSILTITQGLP 369
            C+ E     D + A +  HED  D    +SE +YQ+ DK  S+  + R  + L     +P
Sbjct: 925  CEEEISPVQDEDSAKSQAHEDKDD----ESEISYQKEDKIQSKSSSERDLTQLYHPPKMP 980

Query: 370  MNWELSKAAEEMKNNITNGTSKS 438
             N    K + +    +    S S
Sbjct: 981  KNKSTHKTSSQEDFEVPQPASSS 1003


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,360,747
Number of Sequences: 53049
Number of extensions: 775017
Number of successful extensions: 2577
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2574
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)