Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_E15
         (905 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   2.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   5.1  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    22   8.8  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   8.8  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -2

Query: 418 WKFLG*MTGIWDGMRIFFPYSFILDSCVLKQD 323
           W F      +W  + + F  + IL+ CV+  D
Sbjct: 112 WLFTTDWCDVWRSLDVLFSTASILNLCVISLD 143


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +2

Query: 95  TKFVLNYFQNVFPIVFPVIHNSWYKQCGSI 184
           T  +LNY  +   ++  +++ +WY   G I
Sbjct: 791 THMILNYVGSEDSVIPRILYLTWYSSNGDI 820


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 285 PFAVRNYPNRLKFLQRLYRHLK 220
           PF  +NYP   + + R Y+ +K
Sbjct: 81  PFMQQNYPYEWQLILRRYKIMK 102


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 572 PGPXNPPXXGGXWVPNXIKY 631
           PGP + P  G  W+ + I Y
Sbjct: 54  PGPFSLPIFGTRWIFSCIGY 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,414
Number of Sequences: 438
Number of extensions: 4016
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)