Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_E13
         (856 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0549 + 4396159-4397327,4397341-4398353,4398609-4398676,439...    31   1.5  
01_06_1149 - 34901338-34901466,34901707-34901838,34901940-349022...    30   2.0  
01_01_0186 + 1598046-1598234,1599215-1599277,1599359-1599448,159...    30   2.7  
12_01_0554 + 4498885-4499138,4499249-4499322,4500047-4500129,450...    29   3.6  
09_06_0108 - 20912236-20912364,20912470-20912601,20912718-209130...    29   3.6  
04_04_1357 + 32860677-32860781,32861484-32861588,32861678-328617...    29   3.6  
01_01_0097 - 741881-742977,743100-743320,743438-744156                 29   4.7  
01_06_1148 - 34895562-34895690,34896339-34896464,34896579-348969...    29   6.2  
07_03_1784 - 29492511-29492804,29492913-29492999,29493076-294932...    28   8.3  
03_02_0635 + 9994327-9994644,9995510-9995706,9995806-9995941,999...    28   8.3  
02_03_0065 - 14629676-14629804,14631119-14631247,14631383-146317...    28   8.3  

>12_01_0549 +
           4396159-4397327,4397341-4398353,4398609-4398676,
           4399229-4399291
          Length = 770

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +2

Query: 566 FPGESKYETTLQENSWPVWNEDFKFQLKQKE 658
           F  +SK  TT++EN   VWNE F F ++Q+E
Sbjct: 32  FNSQSK-STTIKENV-AVWNERFSFDMRQRE 60


>01_06_1149 -
           34901338-34901466,34901707-34901838,34901940-34902290,
           34902301-34902619,34902756-34902784,34903641-34903715,
           34903799-34903900,34904002-34904120,34904752-34904875,
           34904976-34905026,34905143-34905241,34905751-34905861
          Length = 546

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 578 SKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKI 682
           SK  T  + N  P WNEDFKF +   E ++   K+
Sbjct: 280 SKKTTVKRGNLNPEWNEDFKFVVTDPETQELEIKV 314


>01_01_0186 +
           1598046-1598234,1599215-1599277,1599359-1599448,
           1599968-1600093,1600583-1600726,1600845-1601255,
           1601283-1601364,1601403-1601491,1602250-1602471,
           1602552-1602827,1603116-1603253,1603772-1604077,
           1604203-1604421
          Length = 784

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +2

Query: 557 VKVFPGESKYET-TLQENSWPVWNEDFKF 640
           VKV  G++ Y+T TL   + PVWN+ F+F
Sbjct: 466 VKVQYGKALYKTKTLSHTTRPVWNDKFEF 494


>12_01_0554 +
           4498885-4499138,4499249-4499322,4500047-4500129,
           4500298-4500322,4500439-4500458,4501263-4501409,
           4501994-4502461
          Length = 356

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +3

Query: 210 RNICSEGSSQLMNLHKRLACSIIQRTGFYMRLI 308
           R I SEG+  +  ++  L+ +I+Q+TGFY   I
Sbjct: 34  RKIESEGAVLMPGVYDALSAAIVQKTGFYAGFI 66


>09_06_0108 -
           20912236-20912364,20912470-20912601,20912718-20913071,
           20913161-20913407,20913489-20913565,20913971-20914045,
           20914118-20914219,20914329-20914447,20914861-20914984,
           20915081-20915131,20915247-20915345,20915839-20915949
          Length = 539

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 578 SKYETTLQENSWPVWNEDFKFQLKQKEAK 664
           SK  T  + N  P WNEDFKF +   E +
Sbjct: 296 SKKTTVKRSNLNPEWNEDFKFVVTDPETQ 324


>04_04_1357 +
           32860677-32860781,32861484-32861588,32861678-32861728,
           32861829-32861949,32862495-32862616,32863032-32863133,
           32863226-32863300,32863391-32863470,32863601-32863751,
           32863850-32864080,32864221-32864517,32864638-32864751,
           32864857-32865030
          Length = 575

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +2

Query: 557 VKVFPGESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKI 682
           V+  P + K   T+  +  P+WNE F+F ++  + +  + KI
Sbjct: 291 VRPLPDKMKRSKTINNDLNPIWNEHFEFIVEDADTQTVTVKI 332


>01_01_0097 - 741881-742977,743100-743320,743438-744156
          Length = 678

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 816 ISYLCXFSIXCLTVFTFVGFLFWR 745
           I+ LC F I  LT+ TF+ F +W+
Sbjct: 312 IAVLCRFVIAPLTLLTFLAFKYWK 335


>01_06_1148 -
           34895562-34895690,34896339-34896464,34896579-34896906,
           34897127-34897216,34897284-34897360,34897519-34897593,
           34897862-34897980,34899240-34899363,34899427-34899477,
           34899590-34899688,34900104-34900214
          Length = 442

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +2

Query: 566 FPGESKYETTLQENSWPVWNEDFKFQLKQKEAKKSSDKIDLQNL 697
           F G  K    ++EN  P W E+F+F+ ++  A   +DK+ ++ L
Sbjct: 350 FKGVEKKTKVVKENRNPRWKEEFEFECEETPA---NDKLHVEVL 390


>07_03_1784 -
           29492511-29492804,29492913-29492999,29493076-29493222,
           29493522-29493690,29493777-29494015,29494111-29494356,
           29494419-29495084
          Length = 615

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = +2

Query: 524 D*VAPMDTLXKVKV--FPGESKYETTLQ-ENSW-PVWNEDFKFQLKQKE 658
           D  +P D   +V +   P +S  + T   E++W PVW EDF F+L   E
Sbjct: 508 DQYSPPDFYARVGIAGVPADSVMKRTRAIEDNWVPVWEEDFTFKLTVPE 556


>03_02_0635 +
           9994327-9994644,9995510-9995706,9995806-9995941,
           9996019-9996270,9996356-9996588,9996695-9996812,
           9996884-9997036,9997126-9997212,9997407-9997697
          Length = 594

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
 Frame = +2

Query: 524 D*VAPMDTLXKVKV--FPGESKYETTLQ-ENSW-PVWNEDFKFQLKQKE 658
           D  +P D   KV +   P +S  + T   E+SW PVW E+F F L   E
Sbjct: 488 DTYSPPDFYAKVGIAGVPSDSVMQKTKAVEDSWVPVWEEEFVFPLTVPE 536


>02_03_0065 -
           14629676-14629804,14631119-14631247,14631383-14631736,
           14631817-14632063,14632155-14632231,14632574-14632648,
           14632721-14632822,14632966-14633084,14633538-14633627,
           14634866-14635022,14635085-14635098,14635425-14635548,
           14635628-14635678,14635793-14635891,14636962-14637072
          Length = 625

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 578 SKYETTLQENSWPVWNEDFKFQLKQKEAK 664
           SK  +  + N  P WNEDFK  +K  E++
Sbjct: 383 SKKTSVKRSNLNPEWNEDFKLVVKDPESQ 411


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,173,324
Number of Sequences: 37544
Number of extensions: 365986
Number of successful extensions: 784
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)