Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_E12
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.010
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.010
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 34 0.12
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 31 1.2
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 1.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.0
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 3.5
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 3.5
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 4.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 4.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 29 4.7
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.7
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 25 7.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.2
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 8.2
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 8.2
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 460 GGGGGXXQKKXPPPPXGXGXFXXXPPPXPP 549
G GGG PPP G G F PPP PP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 460 GGGGGXXQKKXPPPPXGXGXFXXXPPPXPP 549
G GGG PPP G G F PPP PP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = +1
Query: 436 FFFFXXXGGGGGGXXQKK----XPPPPXGXGXFXXXPPPXPP 549
F F GGGGGG PPPP G PPP PP
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +1
Query: 439 FFFXXXGGGGGGXXQKKXPPPPXGXGXFXXXPPPXP 546
F F GGGGGG PPPP PPP P
Sbjct: 17 FLFPSAGGGGGGCGCGAPPPPP------ACAPPPAP 46
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 439 FFFXXXGGGGGGXXQKKXPPPPXGXG 516
F F GGGGGG PPPP G G
Sbjct: 16 FLFNLLGGGGGGCC-APPPPPPCGGG 40
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 493 PPPPXGXGXFXXXPPPXPP 549
PPPP G F PPP PP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
G PPP PP P P PP PP GG P P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 493 PPPPXGXGXFXXXPPPXPP 549
PPPP G PPP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPP 731
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 493 PPPPXGXGXFXXXPPPXPP 549
PPPP G PPP PP
Sbjct: 729 PPPPGGLPPITGGPPPPPP 747
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
G PPP PP P P PP P G GG P P
Sbjct: 740 GGPPPPPP-PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 493 PPPPXGXGXFXXXPPPXPP 549
PPPP G PPP PP
Sbjct: 745 PPPPGGLPPISGGPPPPPP 763
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 493 PPPPXGXGXFXXXPPPXPP 549
PPPP G F PPP PP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
G PPP PP P P PP PP GG P P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 493 PPPPXGXGXFXXXPPPXPP 549
PPPP G PPP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPP 731
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 493 PPPPXGXGXFXXXPPPXPP 549
PPPP G PPP PP
Sbjct: 729 PPPPGGLPPITGGPPPPPP 747
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
G PPP PP P P PP P G GG P P
Sbjct: 740 GGPPPPPP-PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 493 PPPPXGXGXFXXXPPPXPP 549
PPPP G PPP PP
Sbjct: 745 PPPPGGLPPISGGPPPPPP 763
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 493 PPPPXGXGXFXXXPPPXPP 549
PPPP G F PPP PP
Sbjct: 354 PPPPPPPGGFKGGPPPPPP 372
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
G PPP PP P P PP PP GG P P
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 493 PPPPXGXGXFXXXPPPXPP 549
PPPP G PPP PP
Sbjct: 296 PPPPPGLPPITGGPPPPPP 314
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 493 PPPPXGXGXFXXXPPPXPP 549
PPPP G PPP PP
Sbjct: 312 PPPPGGLPPITGGPPPPPP 330
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
G PPP PP P P PP P G GG P P
Sbjct: 323 GGPPPPPP-PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 493 PPPPXGXGXFXXXPPPXPP 549
PPPP G PPP PP
Sbjct: 328 PPPPGGLPPISGGPPPPPP 346
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 27.5 bits (58), Expect(2) = 1.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 823 PPPXPXLXPKXXXKXKXXPPPPXG 894
PPP P L P PPPP G
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPPPG 817
Score = 21.4 bits (43), Expect(2) = 1.8
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +1
Query: 811 PPKKPPPXPXLXP 849
PP PPP P P
Sbjct: 766 PPPPPPPPPHCEP 778
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 27.5 bits (58), Expect(2) = 1.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 823 PPPXPXLXPKXXXKXKXXPPPPXG 894
PPP P L P PPPP G
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPPPG 817
Score = 21.4 bits (43), Expect(2) = 1.8
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +1
Query: 811 PPKKPPPXPXLXP 849
PP PPP P P
Sbjct: 766 PPPPPPPPPHCEP 778
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +3
Query: 777 PPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
PPP PPP P P PP PP G P P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 311
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +3
Query: 777 PPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
PPP PPP P P PP PP G P P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 321
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
G+PPP PPP P P P PP G P P
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
G+PPP PPP P P T + + PP G P P
Sbjct: 287 GSPPPPRAGSPPPPPP---PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 5/55 (9%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPP-----XPPGXGGGXPXXP 920
G+PPP PPP P P PP PP G G P P
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 332
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/44 (29%), Positives = 15/44 (34%)
Frame = +3
Query: 780 PPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXP 911
PP + PPP P T + P PP GG P
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 290
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXP 911
G+PPP PPP + P P + + P PP G P
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPP-PAGGSPPPPRAGSPPPPPPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
G+PPP PPP P P P PP G P P
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
G+PPP PPP P P T + + PP G P P
Sbjct: 308 GSPPPPRAGSPPPPPP---PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 5/55 (9%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPP-----XPPGXGGGXPXXP 920
G+PPP PPP P P PP PP G G P P
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 353
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/44 (29%), Positives = 15/44 (34%)
Frame = +3
Query: 780 PPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXP 911
PP + PPP P T + P PP GG P
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 311
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXP 911
G+PPP PPP + P P + + P PP G P
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPP-PAGGSPPPPRAGSPPPPPPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
G+PPP PPP P P P PP G P P
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXPXXP 920
G+PPP PPP P P T + + PP G P P
Sbjct: 293 GSPPPPRAGSPPPPPP---PRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 5/55 (9%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPP-----XPPGXGGGXPXXP 920
G+PPP PPP P P PP PP G G P P
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPP 338
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/44 (29%), Positives = 15/44 (34%)
Frame = +3
Query: 780 PPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXP 911
PP + PPP P T + P PP GG P
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP 296
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXPPGXGGGXP 911
G+PPP PPP + P P + + P PP G P
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPP-PAGGSPPPPRAGSPPPPPPPRGSP 313
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 442 FFXXXGGGGGGXXQKKXPPPPXGXGXFXXXPPPXP 546
F GGGGG PPPP G G P P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLP 51
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 442 FFXXXGGGGGGXXQKKXPPPPXGXGXFXXXPPPXP 546
F GGGGG PPPP G G P P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLPPLQLP 51
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 442 FFXXXGGGGGGXXQKKXPPPPXGXGXFXXXPPPXP 546
F GGGGG PPPP G G P P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLP 51
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 460 GGGGGXXQKKXPPPPXGXGXFXXXPPPXP 546
GGGGG PPPP P P P
Sbjct: 31 GGGGGGGDAAPPPPPPADAAPAPAPAPEP 59
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 493 PPPPXGXGXFXXXPPPXPP 549
PPPP G + PPP PP
Sbjct: 42 PPPPPCGGGYEAPPPPPPP 60
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +3
Query: 774 APPPXEXNKXXPPPXKTXPXSXPXTXTXXXXKXXPPXP 887
+P P E +K PPP P + P + PP P
Sbjct: 486 SPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 445 FXXXGGGGGGXXQKKXPPPPXGXGXFXXXPP 537
F GGGGG PPP G G PP
Sbjct: 17 FLFPSGGGGGCGCAPPPPPACGCGGGAAPPP 47
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 457 GGGGGGXXQKKXPPPPXGXG 516
GG GGG + PPPP G G
Sbjct: 202 GGSGGGSGRFPPPPPPYGGG 221
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 4/54 (7%)
Frame = +3
Query: 771 GAPPPXEXNKXXPPPXKTXPXSXPXT--XTXXXXKXXPPXPPGXGG--GXPXXP 920
G PP PPP P P PP PPG G G P P
Sbjct: 131 GKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQP 184
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 24.6 bits (51), Expect(2) = 7.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 457 GGGGGGXXQKKXPPPPXGXG 516
GGG GG PPP G G
Sbjct: 45 GGGCGGGCAPPPPPPACGGG 64
Score = 22.2 bits (45), Expect(2) = 7.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 439 FFFXXXGGGGGG 474
F F GGGGGG
Sbjct: 18 FLFPSGGGGGGG 29
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 811 PPKKPPPXPXLXPKXXXKXKXXPPPPXGXG 900
PP PPP P P PPPP G
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSG 659
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 811 PPKKPPPXPXLXPKXXXKXKXXPPPPXGXG 900
PP PPP P P PPPP G
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSG 485
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 457 GGGGGGXXQKKXPPPPXGXGXFXXXPPPXPPXK 555
GG GGG + P G G PP PP K
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAK 651
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 457 GGGGGGXXQKKXPPPPXGXGXFXXXPPPXPPXK 555
GG GGG + P G G PP PP K
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAK 651
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,214,981
Number of Sequences: 27780
Number of extensions: 177116
Number of successful extensions: 1795
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1469
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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