Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_E11
(880 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 314 1e-85
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 314 1e-85
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 314 1e-85
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 314 1e-85
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 314 1e-85
BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p pro... 31 2.8
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 31 2.8
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 30 4.8
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 314 bits (770), Expect = 1e-85
Identities = 152/179 (84%), Positives = 159/179 (88%)
Frame = +2
Query: 224 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 403
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 404 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 583
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 584 IGKPHTVPWQGHRQVWFCNSPADPAPRGTGIVSAPVPXKLLQMAGVQDCYTSARGSTGT 760
IGKPHTVP + + + PAPRGTGIVSAPVP KLL MAG++DCYTSARGSTGT
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPRKLLTMAGIEDCYTSARGSTGT 215
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 314 bits (770), Expect = 1e-85
Identities = 152/179 (84%), Positives = 159/179 (88%)
Frame = +2
Query: 224 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 403
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 404 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 583
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 584 IGKPHTVPWQGHRQVWFCNSPADPAPRGTGIVSAPVPXKLLQMAGVQDCYTSARGSTGT 760
IGKPHTVP + + + PAPRGTGIVSAPVP KLL MAG++DCYTSARGSTGT
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGT 215
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 314 bits (770), Expect = 1e-85
Identities = 152/179 (84%), Positives = 159/179 (88%)
Frame = +2
Query: 224 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 403
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 404 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 583
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 584 IGKPHTVPWQGHRQVWFCNSPADPAPRGTGIVSAPVPXKLLQMAGVQDCYTSARGSTGT 760
IGKPHTVP + + + PAPRGTGIVSAPVP KLL MAG++DCYTSARGSTGT
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGT 215
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 314 bits (770), Expect = 1e-85
Identities = 152/179 (84%), Positives = 159/179 (88%)
Frame = +2
Query: 224 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 403
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 404 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 583
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 584 IGKPHTVPWQGHRQVWFCNSPADPAPRGTGIVSAPVPXKLLQMAGVQDCYTSARGSTGT 760
IGKPHTVP + + + PAPRGTGIVSAPVP KLL MAG++DCYTSARGSTGT
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGT 215
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 314 bits (770), Expect = 1e-85
Identities = 152/179 (84%), Positives = 159/179 (88%)
Frame = +2
Query: 224 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 403
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 404 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 583
KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
Query: 584 IGKPHTVPWQGHRQVWFCNSPADPAPRGTGIVSAPVPXKLLQMAGVQDCYTSARGSTGT 760
IGKPHTVP + + + PAPRGTGIVSAPVP KLL MAG++DCYTSARGSTGT
Sbjct: 157 IGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARGSTGT 215
>BT029103-1|ABJ17036.1| 823|Drosophila melanogaster IP14290p
protein.
Length = 823
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 230 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 87
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 359 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 407
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 230 LPCRAHDHGRDHDRVHEDRRGLYLHRVIRIRREN-RHVHRLEQRPPLLN 87
L C H D R+H ++GL + V+ + REN VH + ++ LLN
Sbjct: 325 LDCTLHIEDVDQVRLHGYQQGLIVRDVLYVNRENINFVHEVYRQAFLLN 373
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 29.9 bits (64), Expect = 4.8
Identities = 25/84 (29%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
Frame = -2
Query: 633 NHTCR*PCQGTV-----CGFPILLPQ*PLRTGKTDNLARIIAPRMAVATSLLHFTPKPI* 469
N CR PC G+ C + +P G T + RI P+ P
Sbjct: 20646 NQKCRDPCPGSCGQSAQCTVSLHIPNCQCPVGMTGDPFRICLPKPRDEPKPPPTPKNPCY 20705
Query: 468 PLLSPMATNALKRVRCPARVCFCT 397
P SP TNA+ RV+ VC C+
Sbjct: 20706 P--SPCGTNAVCRVQGENYVCECS 20727
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,925,003
Number of Sequences: 53049
Number of extensions: 841681
Number of successful extensions: 3231
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2724
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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