Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_E07
(856 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001305-1|AAH01305.1| 265|Homo sapiens ELOVL6 protein protein. 43 0.002
AK027031-1|BAB15632.1| 265|Homo sapiens protein ( Homo sapiens ... 43 0.002
M73489-1|AAA36655.1| 1073|Homo sapiens heat-stable enterotoxin r... 32 3.1
AK074813-1|BAC11225.1| 240|Homo sapiens protein ( Homo sapiens ... 32 3.1
S57551-1|AAB19934.2| 1073|Homo sapiens guanylate cyclase-coupled... 31 4.0
BC113614-1|AAI13615.1| 1508|Homo sapiens gem (nuclear organelle)... 31 7.1
BC036894-1|AAH36894.1| 746|Homo sapiens GEMIN5 protein protein. 31 7.1
AY063750-1|AAL38980.1| 1508|Homo sapiens WD repeat protein Gemin... 31 7.1
AK074066-1|BAB84892.1| 1512|Homo sapiens FLJ00137 protein protein. 31 7.1
AK022748-1|BAB14222.1| 741|Homo sapiens protein ( Homo sapiens ... 31 7.1
BC034344-1|AAH34344.1| 270|Homo sapiens elongation of very long... 30 9.3
AL160011-1|CAH71623.1| 270|Homo sapiens elongation of very long... 30 9.3
>BC001305-1|AAH01305.1| 265|Homo sapiens ELOVL6 protein protein.
Length = 265
Score = 42.7 bits (96), Expect = 0.002
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 509 FDFENHFIHHNYRKWMTENWTVAFYYVGIYMAFIFFGQLYMQNRPR 646
++FE F + +WM ENW +F + +Y AFIF G+ M R +
Sbjct: 11 YEFEKQFNENEAIQWMQENWKKSFLFSALYAAFIFGGRHLMNKRAK 56
>AK027031-1|BAB15632.1| 265|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23378 fis, clone HEP16248. ).
Length = 265
Score = 42.7 bits (96), Expect = 0.002
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 509 FDFENHFIHHNYRKWMTENWTVAFYYVGIYMAFIFFGQLYMQNRPR 646
++FE F + +WM ENW +F + +Y AFIF G+ M R +
Sbjct: 11 YEFEKQFNENEAIQWMQENWKKSFLFSALYAAFIFGGRHLMNKRAK 56
>M73489-1|AAA36655.1| 1073|Homo sapiens heat-stable enterotoxin
receptor protein.
Length = 1073
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = -3
Query: 524 DFQNQKYMNNLE*YPGWMEQRQNMPPFFLSISKHHELVNTVFSQFKHSSSQDFNLAFNNR 345
D N +Y+ + P +M+ L++S + L+N+ FS+ + +DF LA+ N
Sbjct: 274 DLFNDQYLEDNVTAPDYMKN-----VLVLTLSPGNSLLNSSFSRNLSPTKRDFALAYLNG 328
Query: 344 ILLYFYHRRTKLDSRGG*ACCRLCH*FEN 258
ILL+ + + L++ + H F N
Sbjct: 329 ILLFGHMLKIFLENGENITTPKFAHAFRN 357
>AK074813-1|BAC11225.1| 240|Homo sapiens protein ( Homo sapiens
cDNA FLJ90332 fis, clone NT2RP2002063, weakly similar to
GNS1 PROTEIN. ).
Length = 240
Score = 31.9 bits (69), Expect = 3.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 554 MTENWTVAFYYVGIYMAFIFFGQLYMQNRPR 646
M ENW +F + +Y AFIF G+ M R +
Sbjct: 1 MQENWKKSFLFSALYAAFIFGGRHLMNKRAK 31
>S57551-1|AAB19934.2| 1073|Homo sapiens guanylate cyclase-coupled
enterotoxin receptor protein.
Length = 1073
Score = 31.5 bits (68), Expect = 4.0
Identities = 22/89 (24%), Positives = 43/89 (48%)
Frame = -3
Query: 524 DFQNQKYMNNLE*YPGWMEQRQNMPPFFLSISKHHELVNTVFSQFKHSSSQDFNLAFNNR 345
D N +Y+ + P +M+ L++S + L+N+ FS+ + +DF LA+ N
Sbjct: 274 DLFNDQYLEDNVTAPDYMKN-----VLVLTLSPGNSLLNSSFSRNLSPTKRDFRLAYLNG 328
Query: 344 ILLYFYHRRTKLDSRGG*ACCRLCH*FEN 258
IL++ + + L++ + H F N
Sbjct: 329 ILVFGHMLKIFLENGENITTPKFAHAFRN 357
>BC113614-1|AAI13615.1| 1508|Homo sapiens gem (nuclear organelle)
associated protein 5 protein.
Length = 1508
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -3
Query: 437 SISKHHELVNTVFSQFKHSSSQDFNLAF---NNRILLYFYHRRTKLDS 303
+I +HH+LVNT+ +H S + + +N ++Y ++ +T ++S
Sbjct: 573 TIQQHHKLVNTISWHHEHGSQPELSYLMASGSNNAVIYVHNLKTVIES 620
>BC036894-1|AAH36894.1| 746|Homo sapiens GEMIN5 protein protein.
Length = 746
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -3
Query: 437 SISKHHELVNTVFSQFKHSSSQDFNLAF---NNRILLYFYHRRTKLDS 303
+I +HH+LVNT+ +H S + + +N ++Y ++ +T ++S
Sbjct: 573 TIQQHHKLVNTISWHHEHGSQPELSYLMASGSNNAVIYVHNLKTVIES 620
>AY063750-1|AAL38980.1| 1508|Homo sapiens WD repeat protein Gemin5
protein.
Length = 1508
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -3
Query: 437 SISKHHELVNTVFSQFKHSSSQDFNLAF---NNRILLYFYHRRTKLDS 303
+I +HH+LVNT+ +H S + + +N ++Y ++ +T ++S
Sbjct: 573 TIQQHHKLVNTISWHHEHGSQPELSYLMASGSNNAVIYVHNLKTVIES 620
>AK074066-1|BAB84892.1| 1512|Homo sapiens FLJ00137 protein protein.
Length = 1512
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -3
Query: 437 SISKHHELVNTVFSQFKHSSSQDFNLAF---NNRILLYFYHRRTKLDS 303
+I +HH+LVNT+ +H S + + +N ++Y ++ +T ++S
Sbjct: 577 TIQQHHKLVNTISWHHEHGSQPELSYLMASGSNNAVIYVHNLKTVIES 624
>AK022748-1|BAB14222.1| 741|Homo sapiens protein ( Homo sapiens
cDNA FLJ12686 fis, clone NT2RM4002527, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 741
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -3
Query: 437 SISKHHELVNTVFSQFKHSSSQDFNLAF---NNRILLYFYHRRTKLDS 303
+I +HH+LVNT+ +H S + + +N ++Y ++ +T ++S
Sbjct: 573 TIQQHHKLVNTISWHHEHGSQPELSYLMASGSNNAVIYVHNLKTVIES 620
>BC034344-1|AAH34344.1| 270|Homo sapiens elongation of very long
chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3
protein.
Length = 270
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +2
Query: 479 LDITPNYSYIFDFENHFIHHNYRKWMTENWTVAFYYVGIYMAFIFFGQLYMQNR 640
++++ + +F N + + R + E W +F IY+ I GQ YM+ R
Sbjct: 5 MNVSHEVNQLFQPYNFELSKDMRPFFEEYWATSFPIALIYLVLIAVGQNYMKER 58
>AL160011-1|CAH71623.1| 270|Homo sapiens elongation of very long
chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3
protein.
Length = 270
Score = 30.3 bits (65), Expect = 9.3
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +2
Query: 479 LDITPNYSYIFDFENHFIHHNYRKWMTENWTVAFYYVGIYMAFIFFGQLYMQNR 640
++++ + +F N + + R + E W +F IY+ I GQ YM+ R
Sbjct: 5 MNVSHEVNQLFQPYNFELSKDMRPFFEEYWATSFPIALIYLVLIAVGQNYMKER 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,483,569
Number of Sequences: 237096
Number of extensions: 2318510
Number of successful extensions: 8097
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8097
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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