Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_E07
         (856 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41011-5|AAA82288.2|  320|Caenorhabditis elegans Fatty acid elon...    32   0.60 
Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z75951-1|CAB00091.2|  408|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AL032632-15|CAA21593.1|  344|Caenorhabditis elegans Hypothetical...    28   7.4  
AL022273-1|CAA18356.1|  344|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z75550-6|CAA99930.1|  591|Caenorhabditis elegans Hypothetical pr...    28   9.7  

>U41011-5|AAA82288.2|  320|Caenorhabditis elegans Fatty acid
           elongation protein 3 protein.
          Length = 320

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +2

Query: 494 NYSYIFDFENHFIHHNYRKWMTENWTVAFYYVGIYMAFIFFGQLYMQ 634
           NYS    FE  F       WM  +W  +     +Y+A IF G+  M+
Sbjct: 14  NYSIFLPFETSFDAFRSTTWMQNHWYQSITASVVYVAVIFTGKKIME 60


>Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical
           protein T26H8.4 protein.
          Length = 561

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = -1

Query: 787 VLFQXILSEIKNVFDGLPTF*TIIRFKL*VAFHTFILLVLKIFHRYSPWSVLHVQLPEEY 608
           +L   I   I +VF+    F TI RF +  A  +  +++L  +  +  WS+ HV  P   
Sbjct: 86  ILLIAIFHCISSVFEKAQMFKTITRFSVITATTSITIILLIFYELFKIWSLSHV--PNIM 143

Query: 607 ESHVD 593
           E  +D
Sbjct: 144 EVEID 148


>Z75951-1|CAB00091.2|  408|Caenorhabditis elegans Hypothetical
           protein F14A5.1 protein.
          Length = 408

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 614 RI*KPCRFQRNRKPRSSFLSSISYSCDE*NDFQNQKYMNNLE 489
           RI +P +  +N   RSS  SSI +S D   +F    +++N E
Sbjct: 161 RISEPVKMDQNSTSRSSTSSSIKHSSDTSTEFSKILHLSNDE 202


>AL032632-15|CAA21593.1|  344|Caenorhabditis elegans Hypothetical
           protein H22D14.1 protein.
          Length = 344

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 614 RI*KPCRFQRNRKPRSSFLSSISYSCDE*NDFQNQKYMNNLE 489
           RI +P +  +N   RSS  SSI +S D   +F    +++N E
Sbjct: 111 RISEPVKMDQNSTSRSSTSSSIKHSSDTSTEFSKILHLSNDE 152


>AL022273-1|CAA18356.1|  344|Caenorhabditis elegans Hypothetical
           protein H22D14.1 protein.
          Length = 344

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 614 RI*KPCRFQRNRKPRSSFLSSISYSCDE*NDFQNQKYMNNLE 489
           RI +P +  +N   RSS  SSI +S D   +F    +++N E
Sbjct: 111 RISEPVKMDQNSTSRSSTSSSIKHSSDTSTEFSKILHLSNDE 152


>Z75550-6|CAA99930.1|  591|Caenorhabditis elegans Hypothetical
           protein T22C1.8 protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +1

Query: 553 DDRKLD-RGFLLRWNLHGFHILRAIVHAKPTTVSTDEKSLI 672
           DD  LD R  LL WN+  F   R  V   PTT ST   ++I
Sbjct: 385 DDSDLDDRVELLTWNIQQFIQTRGKVDHVPTTPSTPALNII 425


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,420,750
Number of Sequences: 27780
Number of extensions: 382271
Number of successful extensions: 859
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)