Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_E01
         (879 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73426-1|CAA97792.1|  155|Caenorhabditis elegans Hypothetical pr...   156   2e-38
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    29   5.8  

>Z73426-1|CAA97792.1|  155|Caenorhabditis elegans Hypothetical
           protein F40F11.1 protein.
          Length = 155

 Score =  156 bits (379), Expect = 2e-38
 Identities = 73/115 (63%), Positives = 88/115 (76%), Gaps = 3/115 (2%)
 Frame = +2

Query: 80  MADQTEKAFQKQATVFLNRKGGM---KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFT 250
           M++QTE+AF KQ TV LN K  +    +K  R+ + VGLGFK PR+A+EGTYIDKKCP+ 
Sbjct: 1   MSEQTERAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPRDAVEGTYIDKKCPWA 60

Query: 251 GNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 415
           GNV IRG ILTGVV K KM RTIV+RRDYLHY+ KY R+EKRH+N+  H SP FR
Sbjct: 61  GNVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAHCSPAFR 115



 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 25/36 (69%), Positives = 27/36 (75%)
 Frame = +3

Query: 390 PCICRLASGXVEIGDIVTIGECRPLSKTVRFNVLKV 497
           P  C  A   +  GD+VTIGECRPLSKTVRFNVLKV
Sbjct: 107 PAHCSPAFRDIHPGDLVTIGECRPLSKTVRFNVLKV 142


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 152  SSCHLSCSGKRWPVSETLSLSDPPFCLTNEK 60
            +SC++ CSG++W   E  S S+   C +N K
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSET--CGSNGK 1039


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 152  SSCHLSCSGKRWPVSETLSLSDPPFCLTNEK 60
            +SC++ CSG++W   E  S S+   C +N K
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSET--CGSNGK 1039


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,364,200
Number of Sequences: 27780
Number of extensions: 256284
Number of successful extensions: 663
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)