Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_D24
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical pr...    81   1e-15
Z54216-1|CAA90943.1|  308|Caenorhabditis elegans Hypothetical pr...    42   8e-04
AC024214-2|AAF36076.1|  108|Caenorhabditis elegans Hypothetical ...    38   0.012
AC024880-8|AAK85514.1|  167|Caenorhabditis elegans Hypothetical ...    32   0.47 
AF026215-9|AAB71318.2|  319|Caenorhabditis elegans Hypothetical ...    29   4.3  

>Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical
           protein C15H11.8 protein.
          Length = 119

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
 Frame = +2

Query: 86  LSTSTAFCARCGSILPL-LQEFGSVKCYTCKAHYEADNYSKMKFQYTIHFNTISVITNEN 262
           LS    FC  CG+IL L  Q   +V C  C   +      K +    +  + +  I    
Sbjct: 6   LSYDDDFCGYCGAILELPAQAPATVSCKVCSTRWAV----KERVDQVV--SRVEKIYERT 59

Query: 263 ILHTDGPEGP-----VVERKCAKCGYDRMSYATLQLRSADEGQTVFYTCIKCKYKE 415
           +  TDG E       VV+  C KCG+ + SY+T+Q RSADEGQTVFYTC+KCK K+
Sbjct: 60  VADTDGIENDESADAVVDHICTKCGHSKASYSTMQTRSADEGQTVFYTCLKCKKKD 115


>Z54216-1|CAA90943.1|  308|Caenorhabditis elegans Hypothetical
           protein T24H10.1 protein.
          Length = 308

 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 305 KCAKCGYDRMSYATLQLRSADEGQTVFYTCIKC 403
           KC KCG    +Y  LQ RS+DE  T F  C++C
Sbjct: 269 KCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLEC 301


>AC024214-2|AAF36076.1|  108|Caenorhabditis elegans Hypothetical
           protein Y77E11A.6 protein.
          Length = 108

 Score = 37.5 bits (83), Expect = 0.012
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +2

Query: 293 VVERKCAKCGYDRMSYATLQLRSADEGQTVFYTC 394
           V +  C  C + R  +  LQ RSADE  T+FY C
Sbjct: 64  VTDETCPVCSHGRAYFMQLQTRSADEPSTIFYRC 97


>AC024880-8|AAK85514.1|  167|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.5 protein.
          Length = 167

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
 Frame = +2

Query: 104 FCARCGSIL-PLLQEFGSVKCYTCK--AHYEADNYSKMKFQYTIH-FNTISVITNENILH 271
           FC  C ++L P   +   V  Y+C+   H E      +     +H  + ++ I  + I+H
Sbjct: 58  FCPECNNMLYPREDKESRVLMYSCRNCEHREVAANPCIYVNKLVHEIDELTQIVGD-IIH 116

Query: 272 TDGPEGPVVERKCAKCGYDRMSYATLQLRSADEGQTVFYTC 394
            D       E +C  CG  +  +   Q + A+E   ++Y C
Sbjct: 117 -DPTLPKTEEHQCPVCGKSKAVFFQAQTKKAEEEMRLYYVC 156


>AF026215-9|AAB71318.2|  319|Caenorhabditis elegans Hypothetical
           protein F09G2.2 protein.
          Length = 319

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 69  CPLKARYQLVQRFVLAVGPYYPCYK 143
           CP ++  + + +F LA+ PY  CY+
Sbjct: 287 CPFESARRAIDKFRLALSPYLSCYR 311


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,686,586
Number of Sequences: 27780
Number of extensions: 302088
Number of successful extensions: 698
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)