Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_D16
(970 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.076
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.076
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.31
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.31
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.31
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.31
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.93
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.93
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.93
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.93
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 1.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 1.6
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 30 2.8
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 24 5.3
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 6.6
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 6.6
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 25 7.8
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 8.7
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.076
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 606 FSPPXXGGGXPPPPXGXGXXXVLPXVPPP 692
F PP GG PPPP G +P PPP
Sbjct: 325 FGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.076
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 606 FSPPXXGGGXPPPPXGXGXXXVLPXVPPP 692
F PP GG PPPP G +P PPP
Sbjct: 335 FGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVL--PXVPPPAGXXPXXXXXP 725
PP GG PPPP G G + P PPP G P P
Sbjct: 720 PPITGGPPPPPPPG-GLPPITGGPPPPPPPGGLPPISGGP 758
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 615 PXXGGGXPPPPXGXGXXXVLPXVPPPAG 698
P GG PPPP G P PPP G
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVLPXVPPPAGXXPXXXXXP 725
PP GG PPPP G P PPP G P P
Sbjct: 707 PPITGG--PPPPPGLPPITGGPPPPPPPGGLPPITGGP 742
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +3
Query: 615 PXXGGGXPPPPXGXGXXXVL---PXVPPPAGXXPXXXXXP 725
P GG PPPP G + P PPP G P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 5/23 (21%)
Frame = -2
Query: 960 GXPPPPPG-----GGXXXPXPPG 907
G PPPPPG GG P PPG
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPG 733
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 969 GXXGXPPPPPGGGXXXPXPP 910
G PPPPPGG P PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPP 775
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVLPXVPPPAG 698
PP G PPPP G P PPP G
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 954 PPPPPGGGXXXPXPP 910
PPPPPGG P PP
Sbjct: 773 PPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVL--PXVPPPAGXXPXXXXXP 725
PP GG PPPP G G + P PPP G P P
Sbjct: 720 PPITGGPPPPPPPG-GLPPITGGPPPPPPPGGLPPISGGP 758
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 615 PXXGGGXPPPPXGXGXXXVLPXVPPPAG 698
P GG PPPP G P PPP G
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVLPXVPPPAGXXPXXXXXP 725
PP GG PPPP G P PPP G P P
Sbjct: 707 PPITGG--PPPPPGLPPITGGPPPPPPPGGLPPITGGP 742
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +3
Query: 615 PXXGGGXPPPPXGXGXXXVL---PXVPPPAGXXPXXXXXP 725
P GG PPPP G + P PPP G P P
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 5/23 (21%)
Frame = -2
Query: 960 GXPPPPPG-----GGXXXPXPPG 907
G PPPPPG GG P PPG
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPG 733
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 969 GXXGXPPPPPGGGXXXPXPP 910
G PPPPPGG P PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPP 775
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVLPXVPPPAG 698
PP G PPPP G P PPP G
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 954 PPPPPGGGXXXPXPP 910
PPPPPGG P PP
Sbjct: 773 PPPPPGGFKGGPPPP 787
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.1 bits (72), Expect = 0.31
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 857 PPPRCAXPXXXXXXXXXPGGXGXXXPPPGGGGGXP 961
PP A P PGG G PPP GG G P
Sbjct: 386 PPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAP 420
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 606 FSPPXXGGGX--PPPPXGXGXXXVLPXVPPPAGXXP 707
+ PP G G PPPP G G P PP G P
Sbjct: 423 YGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPP 458
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -1
Query: 439 GXXGXXQKNPPPPXGGXXKXXXGXXXXXKXGFSXXPXGGXGXRXP 305
G G PPPP G G GF P GG G P
Sbjct: 402 GPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGP 446
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = -2
Query: 969 GXXGXPPPPPGG-GXXXPXPPGXXKXXXXXXGXAQRGGG 856
G G PPPPGG G P P G G A GG
Sbjct: 429 GPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGG 467
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 854 PPPPRCAXPXXXXXXXXXPGGXGXXXPPPGGGGGXPXXP 970
PPPP P GG G PPP GG G P
Sbjct: 411 PPPP--GGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPP 447
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 854 PPPPRCAXPXXXXXXXXXPGGXGXXXPPPGGGGGXPXXP 970
PPP P PGG G PPPGG G P
Sbjct: 412 PPPGGPGAPGSYGPPQGGPGGFGP--PPPGGPGAYGPPP 448
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.31
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVL--PXVPPPAGXXPXXXXXP 725
PP GG PPPP G G + P PPP G P P
Sbjct: 303 PPITGGPPPPPPPG-GLPPITGGPPPPPPPGGLPPISGGP 341
Score = 31.9 bits (69), Expect = 0.71
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 615 PXXGGGXPPPPXGXGXXXVLPXVPPPAG 698
P GG PPPP G P PPP G
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVLPXVPPPAGXXPXXXXXP 725
PP GG PPPP G P PPP G P P
Sbjct: 290 PPITGG--PPPPPGLPPITGGPPPPPPPGGLPPITGGP 325
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = +3
Query: 615 PXXGGGXPPPPXGXGXXXVL---PXVPPPAGXXPXXXXXP 725
P GG PPPP G + P PPP G P P
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 5/23 (21%)
Frame = -2
Query: 960 GXPPPPPG-----GGXXXPXPPG 907
G PPPPPG GG P PPG
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPG 316
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 969 GXXGXPPPPPGGGXXXPXPP 910
G PPPPPGG P PP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPP 358
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVLPXVPPPAG 698
PP G PPPP G P PPP G
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 954 PPPPPGGGXXXPXPP 910
PPPPPGG P PP
Sbjct: 356 PPPPPGGFKGGPPPP 370
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 610 PPPGXGGXXPPPPXXGVGXXXSP 678
PPPG GG PPPP G P
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPP 98
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 610 PPPGXGGXXPPPPXXGVGXXXSP 678
PPP G PPPP G+G P
Sbjct: 107 PPPMFGAPPPPPPPSGLGVAPQP 129
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVLPXVPPPAGXXP 707
PP GG PPPP G +P PP G P
Sbjct: 87 PPMFAGGIPPPPPMMGG---IPPPPPMFGAPP 115
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 610 PPPGXGGXXPPPPXXGVGXXXSP 678
PPP GG PPPP G P
Sbjct: 97 PPPMMGGIPPPPPMFGAPPPPPP 119
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 854 PPPPRCAXPXXXXXXXXXPGGXGXXXPPPGGGGGXPXXP 970
PPPPR P P G PPP G P P
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 854 PPPPRCAXPXXXXXXXXXPGGXGXXXPPPGGGGGXP 961
PPPP P P G PPP GG P
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = +3
Query: 609 SPPXXGGGXPPPPXGXG---XXXVLPXVPPPAGXXP 707
SPP G G PPPP G PPP G P
Sbjct: 246 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 281
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVLPXVPPPAGXXP 707
PP G PPPP G PP AG P
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVLPXVPPPAGXXP 707
PP GG PPP G P PP G P
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVL----PXVPPPAGXXPXXXXXP 725
PP G PPPP G P PPP G P P
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 854 PPPPRCAXPXXXXXXXXXPGGXGXXXPPPGGGGGXPXXP 970
PPPPR P P G PPP G P P
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 854 PPPPRCAXPXXXXXXXXXPGGXGXXXPPPGGGGGXP 961
PPPP P P G PPP GG P
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = +3
Query: 609 SPPXXGGGXPPPPXGXG---XXXVLPXVPPPAGXXP 707
SPP G G PPPP G PPP G P
Sbjct: 267 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 302
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVLPXVPPPAGXXP 707
PP G PPPP G PP AG P
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVLPXVPPPAGXXP 707
PP GG PPP G P PP G P
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVL----PXVPPPAGXXPXXXXXP 725
PP G PPPP G P PPP G P P
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 854 PPPPRCAXPXXXXXXXXXPGGXGXXXPPPGGGGGXPXXP 970
PPPPR P P G PPP G P P
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 854 PPPPRCAXPXXXXXXXXXPGGXGXXXPPPGGGGGXP 961
PPPP P P G PPP GG P
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = +3
Query: 609 SPPXXGGGXPPPPXGXG---XXXVLPXVPPPAGXXP 707
SPP G G PPPP G PPP G P
Sbjct: 252 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 287
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVLPXVPPPAGXXP 707
PP G PPPP G PP AG P
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVLPXVPPPAGXXP 707
PP GG PPP G P PP G P
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Frame = +3
Query: 612 PPXXGGGXPPPPXGXGXXXVL----PXVPPPAGXXPXXXXXP 725
PP G PPPP G P PPP G P P
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 606 FSPPXXGGGXPPPPXGXGXXXVLPXVPPP 692
F PP G PPPP G P +PPP
Sbjct: 296 FPPPPRGHFPPPPPHFMGRGMPPPFMPPP 324
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 604 FFPPPGXGGXXPPPP 648
FFPPP G PPPP
Sbjct: 295 FFPPPPRGHFPPPPP 309
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 606 FSPPXXGGGXPPPPXGXGXXXVLPXVPPP 692
F PP G PPPP G P +PPP
Sbjct: 296 FPPPPRGHFPPPPPHFMGRGMPPPFMPPP 324
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 604 FFPPPGXGGXXPPPP 648
FFPPP G PPPP
Sbjct: 295 FFPPPPRGHFPPPPP 309
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 826 PPPXGXXXXPPPPPLCP 876
PPP PPPPP CP
Sbjct: 243 PPPPSPVCMPPPPPPCP 259
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 610 PPPGXGGXXPPPPXXGVGXXXSPG 681
PPPG G P PP GVG G
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPPPQG 731
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 630 GXPPPPXGXGXXXVLPXVPPPAG 698
G PPPP G G + PPP G
Sbjct: 754 GAPPPPFGRGAGPMSSFPPPPRG 776
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 23.8 bits (49), Expect(2) = 5.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 954 PPPPPGGGXXXP 919
PPPPP GG P
Sbjct: 591 PPPPPPGGLMGP 602
Score = 23.4 bits (48), Expect(2) = 5.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 969 GXXGXPPPPPGG 934
G PPPPPGG
Sbjct: 587 GGPPPPPPPPGG 598
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 960 GXPPPPPGGGXXXPXPPG 907
G PPPPP G P PPG
Sbjct: 788 GIPPPPPLGIIPPPPPPG 805
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 960 GXPPPPPGGGXXXPXPPG 907
G PPPPP G P PPG
Sbjct: 788 GIPPPPPLGIIPPPPPPG 805
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 25.0 bits (52), Expect(2) = 7.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 954 PPPPPGGGXXXPXPPG 907
PPPPP G P P G
Sbjct: 282 PPPPPKGTGTPPPPTG 297
Score = 21.8 bits (44), Expect(2) = 7.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 960 GXPPPPPGG 934
G PPPPP G
Sbjct: 259 GSPPPPPTG 267
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 954 PPPPPGGGXXXPXPP 910
PPPP GGG P PP
Sbjct: 43 PPPPCGGGYEAPPPP 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,979,413
Number of Sequences: 27780
Number of extensions: 202391
Number of successful extensions: 2888
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2297
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2510937120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -