Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_D12
(907 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 50 6e-07
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 47 4e-06
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 45 2e-05
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 44 2e-05
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 42 9e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 42 9e-05
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 41 2e-04
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 40 4e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 37 0.003
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 33 0.042
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 31 0.17
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 31 0.30
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 29 0.69
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 26 6.4
SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit Ss... 26 8.5
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 49.6 bits (113), Expect = 6e-07
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Frame = +1
Query: 571 KTSKPKMKSVQIKKLKNKKIRGR--NSKPGSQKIKHNFDKKLNENL---DYSCPI--CNK 729
K KS ++N + R R NS G++ + K +E+ +Y C CNK
Sbjct: 520 KIENDNSKSNDYLSVRNTRPRSRSLNSLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNK 579
Query: 730 TFKNKGNVVKHKVTHSEVKPYGCELCDARFTQKGSLNIHMKRHAGXKDEKCQYCGXK 900
F N+ H TH+ +P+ C +C F ++ H + H G K C C +
Sbjct: 580 RFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQR 636
Score = 47.6 bits (108), Expect = 2e-06
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +1
Query: 670 HNFDKKLNENLDY---SCPICNKTFKNKGNVVKHKVTHSEVKPYGCELCDARFTQKGSLN 840
+N +N + +Y C IC K+F + + +H+ H+ +K + C C+ RF + +LN
Sbjct: 585 YNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALN 644
Query: 841 IHMKRHAG 864
H K G
Sbjct: 645 RHYKSEVG 652
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 382 CNKKFVHESTLKAHSFVHEPI-PYVCH-CGVAYYKSCDLKDHKKL 510
CNK+F LK+H H P+ C C ++ + D + H++L
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQL 621
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 46.8 bits (106), Expect = 4e-06
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +1
Query: 721 CNKTFKNKGNVVKHKVTHSEVKPYGCELCDARFTQKGSLNIHMKRHAGXKDEKCQ 885
CNK K NV H TH +PY C+LC A F + L H++ H + C+
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE 504
Score = 39.1 bits (87), Expect = 8e-04
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +1
Query: 667 KHNFDKKLNENLD---YSCPICNKTFKNKGNVVKHKVTHSEVKPYGCELCDARFTQKGSL 837
K+N + + +L Y C +C F ++ +H H +PY CE C RF + +L
Sbjct: 457 KYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDAL 515
Query: 838 NIHMKRH 858
N H +R+
Sbjct: 516 NRHKQRN 522
Score = 33.5 bits (73), Expect = 0.042
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 367 HQCPDCNKKFVHESTLKAHSFVHE-PIPYVCHCGVAYYKSCDLKDHKK 507
++C C FV LK H +HE PYVC C + + L HK+
Sbjct: 473 YRCDLCKAGFVRHHDLKRHLRIHENGRPYVCECLKRFNRLDALNRHKQ 520
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 44.8 bits (101), Expect = 2e-05
Identities = 50/191 (26%), Positives = 77/191 (40%), Gaps = 18/191 (9%)
Frame = +1
Query: 382 CNKKFVHESTLKAHSFVH-EPIPYVCH---CGVAYYKSCDLKDHKKLVHXXXXXXXXXXX 549
C+ +F + L+ H VH +P PY C C + K L+ H H
Sbjct: 90 CDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQ 149
Query: 550 XXXPVKTKTSKPKMKSVQIKKLKNKKIRGRNSKPGSQKIKHNFDKKLNENLDY------- 708
++ T K K+++ + + K I S P + H +K ++ ++
Sbjct: 150 DCE-LRFAT-KQKLQN-HVNRAHEKIIS--YSCPHESCVGHEGFEKWSQLQNHIREAHVP 204
Query: 709 SCPICNKTFKN----KGNVVKHKVTHSEVKPYGC--ELCDARFTQKGSLNIHMK-RHAGX 867
SC IC + FK + +VV H+ T E K Y C E C FT+ +L H+ H G
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 868 KDEKCQYCGXK 900
C CG K
Sbjct: 265 MAFHCDSCGTK 275
Score = 44.0 bits (99), Expect = 3e-05
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 721 CNKTFKNKGNVVKHKVTHSEVKPYGCEL--CDARFTQKGSLNIHMKRHAGXKDEKCQYCG 894
C+K F K ++ HK H+ VKP+ C CDA+F + L H++ H K C + G
Sbjct: 60 CSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEG 119
Score = 43.2 bits (97), Expect = 5e-05
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +1
Query: 706 YSCPI--CNKTFKNKGNVVKHKVTHSEVKPYGCEL--CDARFTQKGSLNIHMKRHAGXKD 873
+ CP C K + + +H THS +P+ C+ C F +K L IH + H K
Sbjct: 23 FHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKP 82
Query: 874 EKCQYCG 894
C Y G
Sbjct: 83 FSCHYDG 89
Score = 37.5 bits (83), Expect = 0.003
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = +1
Query: 361 KVHQCP--DCNKKFVHESTLKAHSFVHE-PIPYVCH---CGVAYYKSCDLKDHKK 507
K+ CP +C KK+ S L+ H H P+VC C A+Y+ LK HK+
Sbjct: 21 KIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKR 75
Score = 29.9 bits (64), Expect = 0.52
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +1
Query: 382 CNKKFVHESTLKAHSFVHEPI-PYVCH---CGVAYYKSCDLKDH 501
C+K F +S LK H H + P+ CH C +Y L+ H
Sbjct: 60 CSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERH 103
Score = 29.5 bits (63), Expect = 0.69
Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 8/146 (5%)
Frame = +1
Query: 361 KVHQCP--DCNKKFVHESTLKAH-SFVHE-PIPYVC-HCGVAYYKSCDLKDHKKLVHXXX 525
K + CP C K F S LK H S +HE + + C CG + L+ H L
Sbjct: 234 KTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRH--LERGTC 291
Query: 526 XXXXXXXXXXXPVKTKTSKPKMKSVQIKKLKNKKIRGRNSKPGSQKIKHNF-DKKLNENL 702
+K ++ V I K K++ ++KI + E
Sbjct: 292 KKAHKPYINECGIK----HDGIEGVAIHDQKEKELSSNLVSDVAKKIINEVTGHGYKEAR 347
Query: 703 DYSC--PICNKTFKNKGNVVKHKVTH 774
+YSC P CN FK ++ +H +H
Sbjct: 348 EYSCSFPECNYRFKRLYDMHRHLNSH 373
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 754 VKHKVTHSEVKPYGC--ELCDARFTQKGSLNIHMKRHAGXKDEKCQYCG 894
++ K S K + C E C ++++ L H++ H+ + C Y G
Sbjct: 11 IESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTG 59
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 44.4 bits (100), Expect = 2e-05
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 706 YSCPICNKTFKNKGNVVKHKVTHSEVKPYGCEL--CDARFTQKGSLNIHMKRH 858
Y CP C + F + + V+H +H+ KP+ C C RFT++ L H++ H
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 781 VKPYGCELCDARFTQKGSLNIHMKRHAGXKDEKCQYCGXK 900
+K Y C C F ++ H++ H G K +C Y K
Sbjct: 1 MKSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCK 40
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 42.3 bits (95), Expect = 9e-05
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 715 PICNKTFKNKGNVVKHKVTHSEVKPYGCELCDARFTQKGSLNIHMKR 855
P C K+F K ++ +H+ TH VK + C C+ F + LN H+++
Sbjct: 31 PDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQ 77
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 376 PDCNKKFVHESTLKAHSFVHEPI-PYVC-HCGVAYYKSCDLKDHKKLVH 516
PDC K F + L+ H HE + + C C A+ +S L H + +H
Sbjct: 31 PDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = +1
Query: 805 CDARFTQKGSLNIHMKRHAGXKDEKCQYC 891
C FT+K L H + H K C +C
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFC 61
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 42.3 bits (95), Expect = 9e-05
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 706 YSCPICNKTFKNKGNVVKHKVTHSEVKPYGCELCDARFTQKGSLNIHMKRHAGXK 870
+ C C K F N+ +HK HS+ +P C C+ + +K L H++R K
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
Score = 30.3 bits (65), Expect = 0.39
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +1
Query: 736 KNKGNVV--KHKVTHSEV----KPYGCELCDARFTQKGSLNIHMKRHAGXKDEKCQYCGX 897
+N NV+ K K+T + + + C+ C RFT+ +L H H+ + C YC
Sbjct: 7 ENSTNVLSAKRKLTEPSLIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEI 66
Query: 898 K 900
K
Sbjct: 67 K 67
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 706 YSCPICNKTFKNKGNVVKHKVTHSEVKPYGCEL--CDARFTQKGSLNIHMKRHAGXKDEK 879
Y CP+C K F + +H TH+ KP+ C C RF++ L H + H +
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRR 85
Score = 30.7 bits (66), Expect = 0.30
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 784 KPYGCELCDARFTQKGSLNIHMKRHAGXKDEKCQYCG 894
+PY C LC F + H++ H G K C + G
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPG 60
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 40.3 bits (90), Expect = 4e-04
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 706 YSCPICNKTFKNKGNVVKH-KVTHSEVKPYGCELCDARFTQKGSLNIHMKRH 858
+ CP C+K FK ++ +H + H+ KP+ C +C RF+++ +L H + H
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
Score = 39.5 bits (88), Expect = 6e-04
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 373 CPDCNKKFVHESTLKAH--SFVHEPIPYVCHCGVAYYKSCDLKDHKKL 510
CP+C+KKF L+ H S P+VC CG + + +L+ H++L
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVCICGKRFSRRDNLRQHERL 472
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 697 NLDYSCPI--CNKTFKNKGNVVKHKVTHSEVKPYGCELCDARFTQKGSLNIHM-KRHAGX 867
++ Y C C K+F K + +H +H+ K + C C + FT+ LN H+ ++H
Sbjct: 14 DIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQ 73
Query: 868 KDEKCQ 885
D Q
Sbjct: 74 NDAGSQ 79
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 33.5 bits (73), Expect = 0.042
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +1
Query: 367 HQCPDCNKKFVHESTLKAHSFVHE-PIPYVCH---CGVAYYKSCDLKDHKKL 510
++C +C + F S+LK H++ H P+VC CG A+ +++ H+++
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRI 519
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 697 NLDYSCPICNKTFKNKGNVVKHKVTHSEVKPYGCEL--CDARFTQKGSLNIHMKRH 858
N+ Y C C + F ++ H +H+ +P+ C+ C F + ++ H + H
Sbjct: 465 NVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 790 YGCELCDARFTQKGSLNIHMKRHAGXKDEKCQYCG 894
Y C C F++ SL IH H G + C Y G
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAG 502
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 562 VKTKTSKPKMKSVQIKKLKNKKIRGRNSKPGSQKIKHNFDKKLNENLDYSC 714
V + PK K++ LK+ ++ G K S+K K+N +K N+N + C
Sbjct: 603 VNANHNAPKKKNLN-DSLKSVELEGNGIKLSSEKGKNNVNKVRNDNARFDC 652
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 694 ENLDYSCPICNKTFKNKGNVVKHKVTHSEVK 786
EN Y C +C+K +KN N +K+ THS ++
Sbjct: 395 ENKPYRCEVCSKRYKNL-NGLKYHRTHSHLQ 424
Score = 30.3 bits (65), Expect = 0.39
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 21/68 (30%)
Frame = +1
Query: 706 YSCPI--CNKTFKNKGNVVKHK---------------VTHS----EVKPYGCELCDARFT 822
Y CP+ C+K +KN+ + HK + H E KPY CE+C R+
Sbjct: 350 YKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAPIPHQGFVVENKPYRCEVCSKRYK 409
Query: 823 QKGSLNIH 846
L H
Sbjct: 410 NLNGLKYH 417
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 29.5 bits (63), Expect = 0.69
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +1
Query: 640 NSKP--GSQKIKHNFDKKLNENLDYSCPICNKTFKNKGNVVKHKVTHSEVKPYGCELCD 810
NSKP S K + + + Y C C + F ++ +H +H+ KP+ C D
Sbjct: 46 NSKPVASSTAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEID 104
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 778 EVKPYGCELCDARFTQKGSLNIHMKRHAGXKDEKC 882
+VK Y CE C F + L H++ H K C
Sbjct: 66 KVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 113 KKTQTFIENLHINNLSFKLFERIKS*GIP 27
K T F+E + IN +F F+ + + G+P
Sbjct: 133 KATDCFVEAVSINPYNFSAFQNLTAIGVP 161
>SPCC1682.07 |ssl1||transcription factor TFIIH complex subunit
Ssl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 367 HQCPDCNKKFVHESTLKAHSFVHEPIPYVCHC 462
+ CP C F + + AH +HE Y C C
Sbjct: 389 YACPSCKNHFCLDCDVFAHEQLHE--CYGCQC 418
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,160,558
Number of Sequences: 5004
Number of extensions: 60742
Number of successful extensions: 220
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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