Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_D12
(907 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 45 1e-04
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 39 0.005
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 36 0.044
01_05_0421 + 21990034-21990392,21991691-21992681 33 0.24
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 33 0.31
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 33 0.41
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 33 0.41
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 33 0.41
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 32 0.55
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 32 0.55
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 32 0.72
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 31 0.95
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 31 0.95
01_01_0990 + 7847066-7847478,7847713-7848679 31 0.95
08_02_1060 + 24007980-24008662,24010078-24010219,24010293-240115... 31 1.3
08_02_1057 + 23995782-23996446,23998026-23998167,23998242-239994... 31 1.3
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 31 1.3
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 30 2.2
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 30 2.9
09_02_0366 + 7941550-7942161,7942230-7942775 30 2.9
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 29 3.8
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600... 29 3.8
05_01_0111 - 752045-752641 29 3.8
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 29 3.8
06_03_0743 + 24069752-24070483,24071890-24072345 29 6.7
03_02_0880 - 12103703-12103726,12103938-12104210,12104389-121049... 29 6.7
09_04_0564 + 18565583-18566449,18569662-18570123 28 8.9
08_02_1172 + 24898290-24899141,24900864-24901328 28 8.9
06_03_1478 - 30420097-30420651 28 8.9
04_04_1066 - 30533114-30533185,30533507-30533614,30533716-305340... 28 8.9
04_03_0129 - 11554917-11555033,11555470-11555613,11555807-115559... 28 8.9
03_02_0567 - 9495290-9495796 28 8.9
03_01_0579 - 4274927-4274998,4275320-4275427,4275529-4275904,427... 28 8.9
01_01_0527 + 3867621-3867764,3867855-3868128,3868216-3868315,386... 28 8.9
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 655 SQKIKHNFDKKLNENLDYSCPICNKTFKNKGNVVKHKVTHSEVKPYGCEL--CDARFTQK 828
S+ K N +K ++E D++C C +F+ ++ +H +HS+ + + C L C + +K
Sbjct: 44 SEIYKSNGEKVVHEG-DHTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRK 102
Query: 829 GSLNIHMKRHAG 864
LN HM +H G
Sbjct: 103 DHLNRHMLKHQG 114
Score = 39.9 bits (89), Expect = 0.003
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +1
Query: 604 IKKLKNKKIRGRNSKPGSQKIKHNFDKKLNENLDYSCPICNKTFKNKGNVVKH-KVTHSE 780
+KK + +R P +++IK +F+ C +F NK N+ KH K +H +
Sbjct: 224 LKKNIKRHLRAHEEVPSTERIKCSFEG------------CECSFSNKSNLTKHIKASHDQ 271
Query: 781 VKPYGCEL--CDARFTQKGSLNIHMKRHA 861
VKP+ C C+ F K + H K A
Sbjct: 272 VKPFACRFTGCEKVFPYKHVRDNHEKSSA 300
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Frame = +1
Query: 670 HNFDKKLNENLDYSCPI--CNKTFKNKGNVVKHKVTHSE---VKPYGCEL-CDARFTQKG 831
H + N + C CNK FK + KH+ +H + V+ CE C FT
Sbjct: 142 HEDETATKSNRQFVCKEEGCNKVFKYASKMKKHEESHVKLDYVEVVCCEPGCMKTFTNVE 201
Query: 832 SLNIHMKRHAGXKDEKCQYCGXKXL 906
L H A + +C CG K L
Sbjct: 202 CLRAH--NQACHQYVQCDICGEKHL 224
Score = 28.7 bits (61), Expect = 6.7
Identities = 43/181 (23%), Positives = 69/181 (38%), Gaps = 17/181 (9%)
Frame = +1
Query: 367 HQCPDCNKKFVHESTLKAHSFVH-EPIPYVC---HCGVAYYKSCDLKDHKKLVHXXXXXX 534
H C +C F + LK H H + ++C C +Y + L H L H
Sbjct: 60 HTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRH-MLKHQGKLFT 118
Query: 535 XXXXXXXXPVKTKTSKPK-MKSVQIKKLKNKKIRGRNSK-PGSQKI-KHNFDKKLNE--- 696
K + + +K + + K R K G K+ K+ K +E
Sbjct: 119 CSMDGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKHEESH 178
Query: 697 -NLDY----SC-PICNKTFKNKGNVVKH-KVTHSEVKPYGCELCDARFTQKGSLNIHMKR 855
LDY C P C KTF N + H + H V+ C++C + +K ++ H++
Sbjct: 179 VKLDYVEVVCCEPGCMKTFTNVECLRAHNQACHQYVQ---CDICGEKHLKK-NIKRHLRA 234
Query: 856 H 858
H
Sbjct: 235 H 235
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 39.1 bits (87), Expect = 0.005
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 721 CNKTFKNKGNVVKHKVTHSEVKPYGCEL--CDARFTQKGSLNIHMKRHAGXKDEKCQYCG 894
C KTF + G + KH H E + Y C CD +F L H H G K+ C + G
Sbjct: 50 CGKTFVDAGALRKHAHVHGE-RQYVCHYAGCDKKFLDSSKLKRHFLIHTGEKNFVCPHEG 108
Score = 34.7 bits (76), Expect = 0.10
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 382 CNKKFVHESTLKAHSFVHEPIPYVCH---CGVAYYKSCDLKDHKKLVH 516
C K FV L+ H+ VH YVCH C + S LK H L+H
Sbjct: 50 CGKTFVDAGALRKHAHVHGERQYVCHYAGCDKKFLDSSKLKRH-FLIH 96
Score = 31.9 bits (69), Expect = 0.72
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +1
Query: 655 SQKIKHNFDKKLNENLDYSCPI--CNKT--FKNKGNVVKHKVTHSEVKPYGCEL--CDAR 816
S K+K +F E ++ CP C K F N+ H THS + C+ C R
Sbjct: 86 SSKLKRHFLIHTGEK-NFVCPHEGCGKVLAFSLDFNLKAHMKTHSVDNYHVCKYPECARR 144
Query: 817 FTQKGSLNIHMKR 855
FTQ+ L H+K+
Sbjct: 145 FTQESKLRAHIKQ 157
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 35.9 bits (79), Expect = 0.044
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 379 DCNKKFVHESTLKAHSFVHEPIPYVCH---CGVAYYKSCDLKDHKKLVH 516
+C K FV + L+ H+ VH Y+C CG + S LK H L+H
Sbjct: 93 NCGKTFVDVAALRKHAHVHNERQYICQEPGCGKKFVDSSKLKRH-HLIH 140
Score = 35.5 bits (78), Expect = 0.059
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +1
Query: 370 QCPDCNKKFVHESTLKAHSFVHE-PIPYVC-H--CGVAYYKSCDLKDHKK 507
Q P C KKFV S LK H +H ++C H CG A+ +L+ H K
Sbjct: 119 QEPGCGKKFVDSSKLKRHHLIHTGQKDFICPHPGCGKAFSLDFNLRSHLK 168
Score = 35.1 bits (77), Expect = 0.077
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 721 CNKTFKNKGNVVKHKVTHSEVKPYGCEL--CDARFTQKGSLNIHMKRHAGXKDEKCQYCG 894
C KTF + + KH H+E + Y C+ C +F L H H G KD C + G
Sbjct: 94 CGKTFVDVAALRKHAHVHNE-RQYICQEPGCGKKFVDSSKLKRHHLIHTGQKDFICPHPG 152
Score = 33.1 bits (72), Expect = 0.31
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +1
Query: 703 DYSCPI--CNKTFKNKGNVVKHKVTHSEVKPYGCEL--CDARFTQKGSLNIHMKRH 858
D+ CP C K F N+ H TH+ + C C RFT L H+K H
Sbjct: 145 DFICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLKSHVKGH 200
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 33.5 bits (73), Expect = 0.24
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 361 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 504
K +C C+KK+ S KAHS + Y C CG + + H+
Sbjct: 81 KKWKCDKCSKKYAVHSDWKAHSKICGTREYKCDCGTIFSRRDSFITHR 128
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +1
Query: 712 CPI--CNKTFKNKGNVVKHKVTHSEVKPYGCEL--CDARFTQKGSLNIHMKRHAGXKDEK 879
CP+ C K F +++H+ H + +P C C F + HM+ H G + +
Sbjct: 1255 CPVKGCKKKFFCHKYLLQHRKVHIDERPLKCTWKGCKKAFKWPWARTEHMRVHTGVRPYE 1314
Query: 880 CQYCG 894
CQ G
Sbjct: 1315 CQEPG 1319
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +1
Query: 721 CNKTFKNKGNVVKHKVTHSEVKPYGCEL--CDARFTQKGSLNIHMKRHAGXKDEK 879
C K FK +H H+ V+PY C+ C F + H KR G +K
Sbjct: 1290 CKKAFKWPWARTEHMRVHTGVRPYECQEPGCGQTFRFVSDFSRH-KRKTGHSSDK 1343
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 361 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 504
K +C C+K++ +S KAHS + Y C CG + + H+
Sbjct: 118 KKWKCDKCSKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHR 165
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 361 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 504
K +C C+KK+ +S KAH+ + Y C CG + + H+
Sbjct: 140 KKWKCDRCSKKYAVQSDWKAHTKICGTKEYRCDCGTIFSRKDSFITHR 187
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 32.7 bits (71), Expect = 0.41
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 361 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 504
K +C C K++ S KAHS V Y C CG + + H+
Sbjct: 162 KKWKCDRCGKRYAVHSDWKAHSKVCGTREYKCDCGTVFSRRDSFVTHR 209
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 32.3 bits (70), Expect = 0.55
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +1
Query: 721 CNKTFKNKGNVVKHKVTHSEVKPYGC--ELCDARFTQKGSLNIHMKRHAGXKDEKC 882
C K F + + +H+ H + +P+ C + C F + H++ H G + KC
Sbjct: 824 CGKRFSSHKYLKRHQCVHRDERPFKCPWDGCPMTFKWLWAQTEHIRVHTGERPYKC 879
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 32.3 bits (70), Expect = 0.55
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 361 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 504
K +C C+K++ S KAHS V Y C CG + + H+
Sbjct: 149 KKWKCDKCSKRYAVHSDWKAHSKVCGTREYRCDCGTLFSRRDSFITHR 196
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 31.9 bits (69), Expect = 0.72
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 361 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAY 474
K +C C+K++ +S KAHS + Y C CG +
Sbjct: 170 KKWKCDKCSKRYAVQSDWKAHSKICGTREYRCDCGTLF 207
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 31.5 bits (68), Expect = 0.95
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 361 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 504
K +C C+K++ +S KAHS Y C CG + + H+
Sbjct: 122 KKWRCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHR 169
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 31.5 bits (68), Expect = 0.95
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 361 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 504
K +C C+KK+ +S KAH+ Y C CG + + H+
Sbjct: 122 KKWKCDKCSKKYAVQSDWKAHTKTCGSREYRCDCGTLFSRRDSFITHR 169
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 31.5 bits (68), Expect = 0.95
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 361 KVHQCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 504
K +C C+K++ +S KAHS Y C CG + + H+
Sbjct: 99 KKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHR 146
>08_02_1060 +
24007980-24008662,24010078-24010219,24010293-24011537,
24012453-24013040
Length = 885
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +1
Query: 646 KPGSQKIKHNFDKKLNENL-----DYSCPICNKTFKNKGNVVKHKVTHSE 780
K GS++ K N K E + + CP+CNKTF+ + H +H++
Sbjct: 342 KMGSKRRKINKVGKFGEPVIGKDGKFECPVCNKTFEEQSRYFGHVGSHAK 391
>08_02_1057 +
23995782-23996446,23998026-23998167,23998242-23999486,
23999521-23999529
Length = 686
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +1
Query: 655 SQKIKHNFDKKLNENLDYSCPICNKTFKNKGNVVKHKVTHSE 780
S K+ + + ++ + CP+CNKTF+ + H +H++
Sbjct: 344 SNKVSKFGEPVIGKDGKFECPVCNKTFEEQSRYFGHIGSHAK 385
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/81 (25%), Positives = 28/81 (34%), Gaps = 6/81 (7%)
Frame = +1
Query: 211 KVVLDRVKIYSCDQCPLGFLDQTDWCLHQTKFSHIXXXXXXXXXXXXXYIKV------HQ 372
+ V D + Y C QC L F Q+ + H F + V +
Sbjct: 303 ETVADDINSYECQQCNLTFHGQSAYAHHLITFHKVSSKRRKSNKVSKFGEPVIGKDGKFE 362
Query: 373 CPDCNKKFVHESTLKAHSFVH 435
CP CNK F +S H H
Sbjct: 363 CPVCNKTFEEQSRYFGHIGSH 383
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Frame = +1
Query: 706 YSCPI--CNKTFKNKGNVVKHKVTHSEVKPYGCEL--CDARFTQKGSLNIHMK 852
+SC + C ++ K ++ +H +TH + K + C + C+ +FT KG++ H++
Sbjct: 287 FSCHVDGCPFSYSRKDHLNRHLLTH-QGKLFACPMEGCNRKFTIKGNIQRHVQ 338
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +1
Query: 703 DYSCPI--CNKTFKNKGNVVKHKVTHSEV---KPYGCEL-CDARFTQKGSLNIHMKRHAG 864
++ CP C KTFK + KH+ +H ++ + CE C FT L H K +
Sbjct: 352 EFICPEENCGKTFKYASKLQKHEESHVKLDYSEVICCEPGCMKAFTNLECLKAHNK--SC 409
Query: 865 XKDEKCQYCGXKXL 906
+ C CG K L
Sbjct: 410 HRHVVCDVCGTKQL 423
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 373 CPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 504
C C K++ ++ LKAH+ Y C CG + + H+
Sbjct: 139 CQRCGKRYAVQADLKAHTKTCGTREYRCDCGTLFTRRDSFVTHR 182
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 796 CELCDARFTQKGSLNIHMKRHAGXK 870
C++C F+ GSL HM H G K
Sbjct: 180 CQMCSKVFSTSGSLREHMMMHGGEK 204
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +1
Query: 706 YSCPICNKTFKNKGNVVKHKVTHSEVKPYGCELCDARFTQKGS 834
+SC +CNKTF N+ H H G E T G+
Sbjct: 188 FSCAVCNKTFNRFNNMQMHMWGHGSQYRKGSESLRGAITVGGA 230
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +1
Query: 370 QCPDCNKKFVHESTLKAHSFVHEPIPYVCHCGVAYYKSCDLKDHK 504
+C C K++ S KAH Y C CG+ + + L H+
Sbjct: 125 RCERCGKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHR 169
>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
21260180-21260461,21261084-21261587,21261973-21261981,
21262122-21262196,21262375-21262449,21262557-21263494,
21263577-21263607,21263694-21263979,21264691-21264905,
21265329-21265437,21265556-21265611,21265730-21265822,
21266348-21266393,21266496-21267221,21267489-21267550,
21267738-21268013,21268604-21268735,21268835-21268909
Length = 1394
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 559 PVKTKTSKPKMKSVQIKKLKNKKIRGRNSKPGSQKIKHNFDKK 687
PV K++ K+K ++ K K+ K G+N K K K + D+K
Sbjct: 936 PVDQKSNGDKIKQQEVLKQKDIKQDGKNDKAKDDKEKKSRDQK 978
>05_01_0111 - 752045-752641
Length = 198
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Frame = +1
Query: 706 YSCPICNKTFKNKGNVVKHKVTH-------------SEVKPYGCELCDARFTQKGSLNIH 846
+ C CN+ F + + H+ +H S+ K +GC +C F +L H
Sbjct: 51 FVCKTCNRVFPSFQALGGHRASHKKPRLDGDGDLSLSKPKLHGCSICGLEFAIGQALGGH 110
Query: 847 MKRH 858
M+RH
Sbjct: 111 MRRH 114
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 706 YSCPICNKTFKNKGNVVKHKVTH 774
+SCP+C KTF N+ H H
Sbjct: 163 FSCPVCRKTFNRYNNLQMHMWGH 185
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 706 YSCPICNKTFKNKGNVVKHKVTH 774
+SCP+C KTF N+ H H
Sbjct: 228 FSCPVCYKTFNRYNNMQMHMWGH 250
>03_02_0880 -
12103703-12103726,12103938-12104210,12104389-12104931,
12105017-12105374,12105696-12105994,12106116-12106189,
12106630-12106717,12107573-12107674,12107813-12107841,
12108118-12108235
Length = 635
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 559 PVKTKTSKPKMKSVQIKKLKNKKIRGRNSKPGSQKIKHNFDK 684
P K + KPK KSV + + + I G N KP + + +K
Sbjct: 116 PPKIEPLKPKAKSVPVPVQRTEVISGNNMKPAKVQNADDVEK 157
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 706 YSCPICNKTFKNKGNVVKHKVTH 774
+SCP+C KTF N+ H H
Sbjct: 273 FSCPVCFKTFNRYNNMQMHMWGH 295
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 706 YSCPICNKTFKNKGNVVKHKVTH 774
+SCP+C KTF N+ H H
Sbjct: 268 FSCPVCFKTFNRYNNMQMHMWGH 290
>06_03_1478 - 30420097-30420651
Length = 184
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 790 YGCELCDARFTQKGSLNIHMKRHAG 864
Y C LCD F + +++ HM+ H G
Sbjct: 56 YPCPLCDRHFPTEKAVHGHMRSHPG 80
>04_04_1066 -
30533114-30533185,30533507-30533614,30533716-30534091,
30534173-30534330,30534416-30534536,30534613-30534831,
30534923-30535022,30535254-30535383,30535474-30535617
Length = 475
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 181 KTMAQLLREVKVVLDRVKIYSCDQCPLGFLDQTDWCLHQTK 303
KT+A+L +E+ +D+ + Y C +G ++ WC K
Sbjct: 224 KTLAEL-KEIDPFVDKDEKYQCTATIIGIQERKTWCYQACK 263
>04_03_0129 -
11554917-11555033,11555470-11555613,11555807-11555999,
11556083-11556139,11556300-11556403,11556882-11556953,
11557069-11557187,11557639-11557783,11558527-11558672,
11558758-11558827,11559000-11559056,11559081-11559228,
11559311-11559432,11559649-11559845,11560296-11560350,
11560468-11560680,11561239-11561386,11561515-11561585,
11563286-11563316,11563532-11563623,11565621-11565688,
11567895-11568069
Length = 847
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 379 DCNKKFVHESTLKAHSFVHEPIP 447
DC KKF H + LK H + E P
Sbjct: 572 DCTKKFYHGNYLKFHRAIREAYP 594
>03_02_0567 - 9495290-9495796
Length = 168
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 15/66 (22%)
Frame = +1
Query: 706 YSCPICNKTFKNKGNVVKHKVTHSE-------------VKP--YGCELCDARFTQKGSLN 840
+ C CN+ F + + H+ +H + KP +GC +C F +L
Sbjct: 28 FECKTCNRQFPSFQALGGHRASHKKPRLADGDPAAEAPAKPKVHGCSICGLEFAVGQALG 87
Query: 841 IHMKRH 858
HM+RH
Sbjct: 88 GHMRRH 93
>03_01_0579 -
4274927-4274998,4275320-4275427,4275529-4275904,
4275986-4276143,4276229-4276349,4276426-4276644,
4276736-4276835,4276923-4277196,4277287-4277430
Length = 523
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 181 KTMAQLLREVKVVLDRVKIYSCDQCPLGFLDQTDWCLHQTK 303
KT+A+L +E+ +D+ + Y C +G ++ WC K
Sbjct: 272 KTLAEL-KEIDPFVDKDEKYQCTATIIGIQERKTWCYQACK 311
>01_01_0527 +
3867621-3867764,3867855-3868128,3868216-3868315,
3868407-3868625,3868702-3868822,3868908-3869065,
3869147-3869522,3869624-3869731,3870053-3870124
Length = 523
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 181 KTMAQLLREVKVVLDRVKIYSCDQCPLGFLDQTDWCLHQTK 303
KT+A+L +E+ +D+ + Y C +G ++ WC K
Sbjct: 272 KTLAEL-KEIDPFVDKDEKYQCTATIIGIQERKTWCYQACK 311
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,504,187
Number of Sequences: 37544
Number of extensions: 334354
Number of successful extensions: 1079
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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