Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_D07
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0053 + 873918-874411,875255-875492,875682-875702                133   2e-31
02_05_0574 - 30086264-30086367,30087653-30087746,30088293-300885...    69   4e-12
03_02_0668 - 10290541-10290644,10290777-10290911,10291812-102919...    67   2e-11
08_02_0108 - 12615091-12615789,12616131-12616311,12616717-12616790     30   2.8  
02_05_0938 + 32901143-32901215,32901841-32901982,32902243-329023...    30   2.8  

>09_01_0053 + 873918-874411,875255-875492,875682-875702
          Length = 250

 Score =  133 bits (322), Expect = 2e-31
 Identities = 69/131 (52%), Positives = 91/131 (69%), Gaps = 4/131 (3%)
 Frame = +3

Query: 189 YANQPSVHITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLSDE 368
           Y   P V I EL D+  KF + DT+ S+AN++RRV IAE PT+AID V++E NS+VL+DE
Sbjct: 10  YQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLNDE 69

Query: 369 FLAHRIGLIPLISDDVVDKIRYSRDCMCVD---FCSECSVEFTLDVKCTD-EQTRHVTTA 536
           F+AHR+GLIPL S   +  +R+SRDC   D    C  CSVEF L  + TD +QT  VT+ 
Sbjct: 70  FIAHRLGLIPLTSAAAM-AMRFSRDCDACDGDGSCEYCSVEFHLAARATDSDQTLEVTSN 128

Query: 537 DLKSSDPRVVP 569
           DL+S+DP+V P
Sbjct: 129 DLRSTDPKVCP 139



 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +1

Query: 595 DQADYGEADEILIIKLRKGQELKLRAYAKKGFGKEHAKWNP 717
           D A   +   ILI+KLR+GQEL+LRA A+KG GK+HAKW+P
Sbjct: 157 DTAAAADQRGILIVKLRRGQELRLRAIARKGIGKDHAKWSP 197


>02_05_0574 -
           30086264-30086367,30087653-30087746,30088293-30088555,
           30089122-30089202,30089293-30089422,30089545-30089730,
           30090013-30090138
          Length = 327

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 31/68 (45%), Positives = 52/68 (76%)
 Frame = +3

Query: 207 VHITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLSDEFLAHRI 386
           V I+ L++++++F +   + S+AN+ RR+ IAE PTMAI+ V +  N++V++DE L+HR+
Sbjct: 72  VEISRLTEDDMEFDMIGIDASIANAFRRILIAELPTMAIEKVLMVDNTSVIADEVLSHRL 131

Query: 387 GLIPLISD 410
           GLIPL +D
Sbjct: 132 GLIPLDAD 139


>03_02_0668 -
           10290541-10290644,10290777-10290911,10291812-10291905,
           10291994-10292089,10292458-10292639,10293578-10293658,
           10293746-10293875,10293996-10294181,10294567-10294692
          Length = 377

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 30/68 (44%), Positives = 51/68 (75%)
 Frame = +3

Query: 207 VHITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLSDEFLAHRI 386
           V +  L++++++F +   + S+AN+ RR+ IAE PTMAI+ V +  N++V++DE L+HR+
Sbjct: 72  VVVNRLTEDDMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTSVIADEVLSHRL 131

Query: 387 GLIPLISD 410
           GLIPL +D
Sbjct: 132 GLIPLDAD 139



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +1

Query: 622 EILIIKLRKGQELKLRAYAKKGFGKEHAKWNP 717
           +I I +L  GQ ++L  +A KG GK HAKW+P
Sbjct: 225 DITIARLGPGQAIELEVHAVKGIGKVHAKWSP 256


>08_02_0108 - 12615091-12615789,12616131-12616311,12616717-12616790
          Length = 317

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -1

Query: 372 RIHRSKRWN*LLTVPNRWPLLVFQR*IRVSYCLLRLARYLPQRILH 235
           R+   +R+  L  +P RW  L  Q+ IR   C  +L+R LP+  L+
Sbjct: 6   RLRHQRRYYRLRLLPPRWGSLRPQQYIRALTCNCKLSRSLPKHTLN 51


>02_05_0938 +
           32901143-32901215,32901841-32901982,32902243-32902314,
           32902573-32902644,32902711-32902782,32902913-32902948,
           32903001-32903072,32903319-32903387,32903483-32903554,
           32903668-32903739,32903838-32903909,32904153-32904224,
           32904470-32904541,32904623-32904694,32904782-32904853,
           32904911-32905003,32905150-32905218,32905315-32905386,
           32905479-32905552,32905643-32905771,32905966-32906331,
           32906584-32906954,32907522-32907890
          Length = 884

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/59 (25%), Positives = 30/59 (50%)
 Frame = -3

Query: 511 SSVHFTSNVNSTLHSEQKSTHMQSREYLILSTTSSDMSGMRPMRCAKNSSLKTVELASN 335
           S++H+ +  N+ L              + L+ +S+ +SG  P+  AK  +L T++L+ N
Sbjct: 270 STLHYLNLANNNLEGPIPDNISSCMNLISLNLSSNYLSGAIPIELAKMKNLDTLDLSCN 328


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,548,208
Number of Sequences: 37544
Number of extensions: 414177
Number of successful extensions: 910
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)