Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_D07
(879 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060644-1|AAL28192.1| 275|Drosophila melanogaster GH07456p pro... 241 9e-64
AJ133650-1|CAB38635.1| 275|Drosophila melanogaster RNA polymera... 241 9e-64
AE014134-2412|AAF53342.1| 275|Drosophila melanogaster CG7885-PA... 241 9e-64
AE014134-2413|AAN10853.1| 117|Drosophila melanogaster CG7885-PB... 164 2e-40
BT001794-1|AAN71549.1| 117|Drosophila melanogaster RH25219p pro... 161 9e-40
AY119625-1|AAM50279.1| 333|Drosophila melanogaster LP03982p pro... 59 7e-09
AE014134-823|AAF52185.1| 333|Drosophila melanogaster CG3756-PA ... 59 7e-09
AE014297-3532|AAF56286.1| 1116|Drosophila melanogaster CG6454-PA... 30 4.8
AE014297-3531|AAN13993.1| 1558|Drosophila melanogaster CG6454-PB... 30 4.8
>AY060644-1|AAL28192.1| 275|Drosophila melanogaster GH07456p
protein.
Length = 275
Score = 241 bits (590), Expect = 9e-64
Identities = 109/129 (84%), Positives = 126/129 (97%)
Frame = +3
Query: 183 MPYANQPSVHITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS 362
MPYANQPSV ITEL+D+NVKFV+EDTELSVANS+RRVFIAETPT+AIDWVQLEANSTVLS
Sbjct: 1 MPYANQPSVQITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLS 60
Query: 363 DEFLAHRIGLIPLISDDVVDKIRYSRDCMCVDFCSECSVEFTLDVKCTDEQTRHVTTADL 542
DEFLAHRIGLIPLISDDVV++++Y+RDC+C+DFC ECSVEFTLDVKC++EQTRHVTTADL
Sbjct: 61 DEFLAHRIGLIPLISDDVVERLQYTRDCICLDFCPECSVEFTLDVKCSEEQTRHVTTADL 120
Query: 543 KSSDPRVVP 569
KSS+ +V+P
Sbjct: 121 KSSNAKVLP 129
Score = 101 bits (241), Expect = 2e-21
Identities = 45/66 (68%), Positives = 48/66 (72%)
Frame = +2
Query: 680 KKVLGKSMQNGIPTAGVSFEYDPDNIMRHTLYPKPDEWPKSEPTELXEDQYEADFTXEAX 859
KK GK PTAGV FEYDPDN MRHTLYPKPDEWPKSE TEL +DQYEA + EA
Sbjct: 167 KKGFGKEHAKWNPTAGVCFEYDPDNSMRHTLYPKPDEWPKSEHTELEDDQYEAPYNWEAK 226
Query: 860 PNXXFY 877
PN F+
Sbjct: 227 PNKFFF 232
Score = 86.2 bits (204), Expect = 5e-17
Identities = 40/49 (81%), Positives = 45/49 (91%), Gaps = 1/49 (2%)
Frame = +1
Query: 574 TSRHRDEDQADYGEA-DEILIIKLRKGQELKLRAYAKKGFGKEHAKWNP 717
TSR++ E+ +YGE+ DEILIIKLRKGQELKLRAYAKKGFGKEHAKWNP
Sbjct: 131 TSRNQGEEDNEYGESNDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNP 179
>AJ133650-1|CAB38635.1| 275|Drosophila melanogaster RNA polymerase
II p33 subunit protein.
Length = 275
Score = 241 bits (590), Expect = 9e-64
Identities = 109/129 (84%), Positives = 126/129 (97%)
Frame = +3
Query: 183 MPYANQPSVHITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS 362
MPYANQPSV ITEL+D+NVKFV+EDTELSVANS+RRVFIAETPT+AIDWVQLEANSTVLS
Sbjct: 1 MPYANQPSVQITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLS 60
Query: 363 DEFLAHRIGLIPLISDDVVDKIRYSRDCMCVDFCSECSVEFTLDVKCTDEQTRHVTTADL 542
DEFLAHRIGLIPLISDDVV++++Y+RDC+C+DFC ECSVEFTLDVKC++EQTRHVTTADL
Sbjct: 61 DEFLAHRIGLIPLISDDVVERLQYTRDCICLDFCPECSVEFTLDVKCSEEQTRHVTTADL 120
Query: 543 KSSDPRVVP 569
KSS+ +V+P
Sbjct: 121 KSSNAKVLP 129
Score = 101 bits (241), Expect = 2e-21
Identities = 45/66 (68%), Positives = 48/66 (72%)
Frame = +2
Query: 680 KKVLGKSMQNGIPTAGVSFEYDPDNIMRHTLYPKPDEWPKSEPTELXEDQYEADFTXEAX 859
KK GK PTAGV FEYDPDN MRHTLYPKPDEWPKSE TEL +DQYEA + EA
Sbjct: 167 KKGFGKEHAKWNPTAGVCFEYDPDNSMRHTLYPKPDEWPKSEHTELEDDQYEAPYNWEAK 226
Query: 860 PNXXFY 877
PN F+
Sbjct: 227 PNKFFF 232
Score = 86.2 bits (204), Expect = 5e-17
Identities = 40/49 (81%), Positives = 45/49 (91%), Gaps = 1/49 (2%)
Frame = +1
Query: 574 TSRHRDEDQADYGEA-DEILIIKLRKGQELKLRAYAKKGFGKEHAKWNP 717
TSR++ E+ +YGE+ DEILIIKLRKGQELKLRAYAKKGFGKEHAKWNP
Sbjct: 131 TSRNQGEEDNEYGESNDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNP 179
>AE014134-2412|AAF53342.1| 275|Drosophila melanogaster CG7885-PA,
isoform A protein.
Length = 275
Score = 241 bits (590), Expect = 9e-64
Identities = 109/129 (84%), Positives = 126/129 (97%)
Frame = +3
Query: 183 MPYANQPSVHITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS 362
MPYANQPSV ITEL+D+NVKFV+EDTELSVANS+RRVFIAETPT+AIDWVQLEANSTVLS
Sbjct: 1 MPYANQPSVQITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLS 60
Query: 363 DEFLAHRIGLIPLISDDVVDKIRYSRDCMCVDFCSECSVEFTLDVKCTDEQTRHVTTADL 542
DEFLAHRIGLIPLISDDVV++++Y+RDC+C+DFC ECSVEFTLDVKC++EQTRHVTTADL
Sbjct: 61 DEFLAHRIGLIPLISDDVVERLQYTRDCICLDFCPECSVEFTLDVKCSEEQTRHVTTADL 120
Query: 543 KSSDPRVVP 569
KSS+ +V+P
Sbjct: 121 KSSNAKVLP 129
Score = 101 bits (241), Expect = 2e-21
Identities = 45/66 (68%), Positives = 48/66 (72%)
Frame = +2
Query: 680 KKVLGKSMQNGIPTAGVSFEYDPDNIMRHTLYPKPDEWPKSEPTELXEDQYEADFTXEAX 859
KK GK PTAGV FEYDPDN MRHTLYPKPDEWPKSE TEL +DQYEA + EA
Sbjct: 167 KKGFGKEHAKWNPTAGVCFEYDPDNSMRHTLYPKPDEWPKSEHTELEDDQYEAPYNWEAK 226
Query: 860 PNXXFY 877
PN F+
Sbjct: 227 PNKFFF 232
Score = 86.2 bits (204), Expect = 5e-17
Identities = 40/49 (81%), Positives = 45/49 (91%), Gaps = 1/49 (2%)
Frame = +1
Query: 574 TSRHRDEDQADYGEA-DEILIIKLRKGQELKLRAYAKKGFGKEHAKWNP 717
TSR++ E+ +YGE+ DEILIIKLRKGQELKLRAYAKKGFGKEHAKWNP
Sbjct: 131 TSRNQGEEDNEYGESNDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNP 179
>AE014134-2413|AAN10853.1| 117|Drosophila melanogaster CG7885-PB,
isoform B protein.
Length = 117
Score = 164 bits (398), Expect = 2e-40
Identities = 76/87 (87%), Positives = 86/87 (98%)
Frame = +3
Query: 183 MPYANQPSVHITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS 362
MPYANQPSV ITEL+D+NVKFV+EDTELSVANS+RRVFIAETPT+AIDWVQLEANSTVLS
Sbjct: 1 MPYANQPSVQITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLS 60
Query: 363 DEFLAHRIGLIPLISDDVVDKIRYSRD 443
DEFLAHRIGLIPLISDDVV++++Y+RD
Sbjct: 61 DEFLAHRIGLIPLISDDVVERLQYTRD 87
>BT001794-1|AAN71549.1| 117|Drosophila melanogaster RH25219p
protein.
Length = 117
Score = 161 bits (392), Expect = 9e-40
Identities = 75/86 (87%), Positives = 85/86 (98%)
Frame = +3
Query: 183 MPYANQPSVHITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS 362
MPYANQPSV ITEL+D+NVKFV+EDTELSVANS+RRVFIAETPT+AIDWVQLEANSTVLS
Sbjct: 1 MPYANQPSVQITELTDDNVKFVLEDTELSVANSLRRVFIAETPTLAIDWVQLEANSTVLS 60
Query: 363 DEFLAHRIGLIPLISDDVVDKIRYSR 440
DEFLAHRIGLIPLISDDVV++++Y+R
Sbjct: 61 DEFLAHRIGLIPLISDDVVERLQYTR 86
>AY119625-1|AAM50279.1| 333|Drosophila melanogaster LP03982p
protein.
Length = 333
Score = 59.3 bits (137), Expect = 7e-09
Identities = 30/100 (30%), Positives = 59/100 (59%)
Frame = +3
Query: 207 VHITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLSDEFLAHRI 386
+ I ++ ++F + ++AN+ RR+ +++ P+MAI+ V + N++++ DE LAHR+
Sbjct: 43 IKIVRNDEDGLEFDLIGVYPAIANAFRRLMLSDVPSMAIEKVYIYNNTSIIQDEVLAHRM 102
Query: 387 GLIPLISDDVVDKIRYSRDCMCVDFCSECSVEFTLDVKCT 506
GL+PL +D + Y + + ++EF L VKC+
Sbjct: 103 GLLPLRADPRL--FAYRTEESTEAGTEQDTLEFELKVKCS 140
Score = 43.6 bits (98), Expect = 4e-04
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1
Query: 619 DEILIIKLRKGQELKLRAYAKKGFGKEHAKWNP 717
D+ILI +LR G EL LR A KG G++HAK++P
Sbjct: 188 DDILIAQLRPGHELDLRLVAVKGLGRDHAKFSP 220
>AE014134-823|AAF52185.1| 333|Drosophila melanogaster CG3756-PA
protein.
Length = 333
Score = 59.3 bits (137), Expect = 7e-09
Identities = 30/100 (30%), Positives = 59/100 (59%)
Frame = +3
Query: 207 VHITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLSDEFLAHRI 386
+ I ++ ++F + ++AN+ RR+ +++ P+MAI+ V + N++++ DE LAHR+
Sbjct: 43 IKIVRNDEDGLEFDLIGVYPAIANAFRRLMLSDVPSMAIEKVYIYNNTSIIQDEVLAHRM 102
Query: 387 GLIPLISDDVVDKIRYSRDCMCVDFCSECSVEFTLDVKCT 506
GL+PL +D + Y + + ++EF L VKC+
Sbjct: 103 GLLPLRADPRL--FAYRTEESTEAGTEQDTLEFELKVKCS 140
Score = 43.6 bits (98), Expect = 4e-04
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1
Query: 619 DEILIIKLRKGQELKLRAYAKKGFGKEHAKWNP 717
D+ILI +LR G EL LR A KG G++HAK++P
Sbjct: 188 DDILIAQLRPGHELDLRLVAVKGLGRDHAKFSP 220
>AE014297-3532|AAF56286.1| 1116|Drosophila melanogaster CG6454-PA,
isoform A protein.
Length = 1116
Score = 29.9 bits (64), Expect = 4.8
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 213 ITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLSDEFLAHRIGL 392
+ + S E VE SV + + PT DW + E + L DE L R+
Sbjct: 17 VMDKSSETTDAFVEIKLASVTHKTDVFRKSLNPTWNTDWFRFEVDDAELQDEPLQIRLMD 76
Query: 393 IPLIS-DDVVDKIRYSRDCMCVDFCSE 470
S +D + K+ S + +C++ S+
Sbjct: 77 YDTYSANDAIGKVNISLNPLCLESSSQ 103
>AE014297-3531|AAN13993.1| 1558|Drosophila melanogaster CG6454-PB,
isoform B protein.
Length = 1558
Score = 29.9 bits (64), Expect = 4.8
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 213 ITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLSDEFLAHRIGL 392
+ + S E VE SV + + PT DW + E + L DE L R+
Sbjct: 17 VMDKSSETTDAFVEIKLASVTHKTDVFRKSLNPTWNTDWFRFEVDDAELQDEPLQIRLMD 76
Query: 393 IPLIS-DDVVDKIRYSRDCMCVDFCSE 470
S +D + K+ S + +C++ S+
Sbjct: 77 YDTYSANDAIGKVNISLNPLCLESSSQ 103
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,230,337
Number of Sequences: 53049
Number of extensions: 731989
Number of successful extensions: 1771
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1768
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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