Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_D07
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80215-1|CAB02268.2| 282|Caenorhabditis elegans Hypothetical pr... 173 2e-43
AF125965-2|AAL38961.1| 366|Caenorhabditis elegans Hypothetical ... 65 7e-11
EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c pro... 29 3.3
EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b pro... 29 3.3
AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical ... 29 3.3
AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical ... 29 3.3
AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical ... 29 3.3
AC024761-4|AAF59466.2| 332|Caenorhabditis elegans Hypothetical ... 29 4.4
>Z80215-1|CAB02268.2| 282|Caenorhabditis elegans Hypothetical
protein C36B1.3 protein.
Length = 282
Score = 173 bits (420), Expect = 2e-43
Identities = 75/120 (62%), Positives = 99/120 (82%)
Frame = +3
Query: 183 MPYANQPSVHITELSDENVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS 362
MPYANQP++ +TEL+++ +KFV+ DT+LSVANS+RRVF+AE PT+AIDWVQ+E N++VL
Sbjct: 1 MPYANQPNIEVTELTNDIIKFVLWDTDLSVANSLRRVFMAEVPTIAIDWVQIETNTSVLH 60
Query: 363 DEFLAHRIGLIPLISDDVVDKIRYSRDCMCVDFCSECSVEFTLDVKCTDEQTRHVTTADL 542
DEF+AHR+GLIP ISD V+K++Y+RDC C +FC ECS+ F L +KC DE T VTT L
Sbjct: 61 DEFIAHRMGLIPFISDYHVEKMQYTRDCECAEFCDECSIPFILQMKCKDEATLAVTTEHL 120
Score = 74.1 bits (174), Expect = 1e-13
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +1
Query: 580 RHRDEDQADYGEADEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPDC 723
R R + ++ +EILI+KLRKGQEL L+AY KKGFGKEHAKWNP C
Sbjct: 139 RERGSTRDEFHNREEILIVKLRKGQELNLKAYVKKGFGKEHAKWNPTC 186
Score = 71.7 bits (168), Expect = 6e-13
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +2
Query: 680 KKVLGKSMQNGIPTAGVSFEYDPDNIMRHTLYPKPDEWPKSEPTELXED--QYEADFTXE 853
KK GK PT GV+FEYDPDN +RHT+YP +EWP+S+ + L ED + EA F +
Sbjct: 172 KKGFGKEHAKWNPTCGVAFEYDPDNALRHTIYPNVEEWPRSDHSSLPEDSTEKEAPFEPD 231
Query: 854 AXPNXXFY 877
PN ++
Sbjct: 232 NKPNKFWF 239
>AF125965-2|AAL38961.1| 366|Caenorhabditis elegans Hypothetical
protein H43I07.2 protein.
Length = 366
Score = 64.9 bits (151), Expect = 7e-11
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = +3
Query: 189 YANQPSVHITELSDENV--KFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS 362
Y +Q V + SD+ + +F + E +AN++RRV IAE PTMA++ + L N++V+
Sbjct: 50 YCDQIQVAMVNESDDGMTLEFDITRIEAPIANALRRVLIAEVPTMALEKIYLYQNTSVIQ 109
Query: 363 DEFLAHRIGLIPLISD 410
DE L HR+GL+PL D
Sbjct: 110 DEVLCHRLGLLPLRVD 125
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/34 (50%), Positives = 27/34 (79%)
Frame = +1
Query: 616 ADEILIIKLRKGQELKLRAYAKKGFGKEHAKWNP 717
+D+IL+ KLR GQE++ +A KG G++HAK++P
Sbjct: 215 SDDILVAKLRPGQEIEASCHAVKGIGRDHAKFSP 248
>EF473218-1|ABQ42570.1| 765|Caenorhabditis elegans Y55D9A.1c
protein.
Length = 765
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 713 IPTAGVSFEYDPDNIMRHTLYPKPDEWPKSEPTELXEDQYEADFT 847
I +GVS YD D + H Y D PK L + +E+ T
Sbjct: 231 IDGSGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFESRTT 275
>EF473217-1|ABQ42569.1| 818|Caenorhabditis elegans Y55D9A.1b
protein.
Length = 818
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 713 IPTAGVSFEYDPDNIMRHTLYPKPDEWPKSEPTELXEDQYEADFT 847
I +GVS YD D + H Y D PK L + +E+ T
Sbjct: 284 IDGSGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFESRTT 328
>AL032649-5|CAM82814.1| 765|Caenorhabditis elegans Hypothetical
protein Y55D9A.1c protein.
Length = 765
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 713 IPTAGVSFEYDPDNIMRHTLYPKPDEWPKSEPTELXEDQYEADFT 847
I +GVS YD D + H Y D PK L + +E+ T
Sbjct: 231 IDGSGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFESRTT 275
>AL032649-2|CAC70120.1| 818|Caenorhabditis elegans Hypothetical
protein Y55D9A.1b protein.
Length = 818
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 713 IPTAGVSFEYDPDNIMRHTLYPKPDEWPKSEPTELXEDQYEADFT 847
I +GVS YD D + H Y D PK L + +E+ T
Sbjct: 284 IDGSGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFESRTT 328
>AL032649-1|CAA21701.1| 816|Caenorhabditis elegans Hypothetical
protein Y55D9A.1a protein.
Length = 816
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 713 IPTAGVSFEYDPDNIMRHTLYPKPDEWPKSEPTELXEDQYEADFT 847
I +GVS YD D + H Y D PK L + +E+ T
Sbjct: 282 IDGSGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFESRTT 326
>AC024761-4|AAF59466.2| 332|Caenorhabditis elegans Hypothetical
protein Y38C1AA.6 protein.
Length = 332
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 417 VDKIRYSRDCMCVDFCSECSVEFTLDVKCTDEQTR 521
+D +Y+ D +C CSEC C D TR
Sbjct: 79 IDNFKYNPDALCAGTCSECKTHTDKLRICVDCLTR 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,386,146
Number of Sequences: 27780
Number of extensions: 391495
Number of successful extensions: 1021
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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