Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_D07
         (879 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    29   0.075
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    29   0.075
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    25   0.70 
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              23   4.9  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   8.6  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 28.7 bits (61), Expect = 0.075
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 742 IFKGHTSSRDSILHALSQNLFLHMPEAS 659
           +F GH S+  S+LHAL Q  + H+PE S
Sbjct: 253 LFSGHESNIASVLHAL-QLYYPHVPEYS 279


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 28.7 bits (61), Expect = 0.075
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 742 IFKGHTSSRDSILHALSQNLFLHMPEAS 659
           +F GH S+  S+LHAL Q  + H+PE S
Sbjct: 268 LFSGHESNIASVLHAL-QLYYPHVPEYS 294


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = -3

Query: 631 SIFHLLRHNRPGLHLYVAM*XGTTLGSLDFKSAVVTCLVCSSVHFTSNVNSTLHSEQKS 455
           +I+H LRH R GL   +    G  L +L F     T +  + V +    NS  +SE+ +
Sbjct: 135 AIYHPLRHYRSGLKRAIRSIFGAWLIALIFAMPFATYVDINYVEYPQ--NSKRNSEESA 191


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/14 (64%), Positives = 12/14 (85%), Gaps = 1/14 (7%)
 Frame = -3

Query: 538 SAVVTCLVCS-SVH 500
           S ++TCL+CS SVH
Sbjct: 8   SLLITCLICSPSVH 21


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
 Frame = -2

Query: 761 SLYY--QGHIQRTHQQSGFHFACSF 693
           S YY  + H Q  H+QS   + C F
Sbjct: 16  SCYYSLKRHFQDKHEQSDTLYVCEF 40


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,747
Number of Sequences: 438
Number of extensions: 4329
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)