Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_D04
         (905 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC001531-1|AAH01531.1|  393|Homo sapiens defective in sister chr...    31   7.6  
BC001316-1|AAH01316.1|  393|Homo sapiens defective in sister chr...    31   7.6  
AY358866-1|AAQ89225.1|  393|Homo sapiens KRTR9337 protein.             31   7.6  
AK054585-1|BAB70767.1|  393|Homo sapiens protein ( Homo sapiens ...    31   7.6  

>BC001531-1|AAH01531.1|  393|Homo sapiens defective in sister
           chromatid cohesion homolog 1 (S. cerevisiae) protein.
          Length = 393

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -1

Query: 695 NVCQLG-VWKVXRLPSRXKYAKHASQLVSXQVWKVXRLP 582
           N C++G  W++       K   H +QLV  + W   ++P
Sbjct: 187 NACKIGGYWRILEFDYEMKLLNHVTQLVDSESWSFGKVP 225


>BC001316-1|AAH01316.1|  393|Homo sapiens defective in sister
           chromatid cohesion homolog 1 (S. cerevisiae) protein.
          Length = 393

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -1

Query: 695 NVCQLG-VWKVXRLPSRXKYAKHASQLVSXQVWKVXRLP 582
           N C++G  W++       K   H +QLV  + W   ++P
Sbjct: 187 NACKIGGYWRILEFDYEMKLLNHVTQLVDSESWSFGKVP 225


>AY358866-1|AAQ89225.1|  393|Homo sapiens KRTR9337 protein.
          Length = 393

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -1

Query: 695 NVCQLG-VWKVXRLPSRXKYAKHASQLVSXQVWKVXRLP 582
           N C++G  W++       K   H +QLV  + W   ++P
Sbjct: 187 NACKIGGYWRILEFDYEMKLLNHVTQLVDSESWSFGKVP 225


>AK054585-1|BAB70767.1|  393|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30023 fis, clone 3NB692001022, weakly similar to
           Putative C3HC4-type RING zinc finger protein. ).
          Length = 393

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -1

Query: 695 NVCQLG-VWKVXRLPSRXKYAKHASQLVSXQVWKVXRLP 582
           N C++G  W++       K   H +QLV  + W   ++P
Sbjct: 187 NACKIGGYWRILEFDYEMKLLNHVTQLVDSESWSFGKVP 225


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,229,950
Number of Sequences: 237096
Number of extensions: 2333347
Number of successful extensions: 4120
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4108
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)