Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_D02
         (1046 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.93 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.93 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.93
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +3

Query: 597 APPPPPPXXXGXXXXGGGGGGXXXXXXPP 683
           APPPPPP         GG  G      PP
Sbjct: 584 APPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 24.2 bits (50), Expect = 6.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 997 GGXXXPPPPPXP 962
           GG   PPPPP P
Sbjct: 525 GGPLGPPPPPPP 536


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.1 bits (57), Expect = 0.93
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -3

Query: 1038 GXXXPLXFFFFXGXGGXXPPPPPP 967
            G   P    F  G G   PPPPPP
Sbjct: 767  GMPSPSRSAFADGIGSPPPPPPPP 790



 Score = 25.8 bits (54), Expect = 2.1
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 1010 FFXGXGGXXPPPPPP 966
            F  G G   PPPPPP
Sbjct: 776  FADGIGSPPPPPPPP 790



 Score = 25.8 bits (54), Expect = 2.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 594 GAPPPPPPXXXGXXXXGG 647
           G+PPPPPP        GG
Sbjct: 781 GSPPPPPPPPPSSLSPGG 798


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 3.8
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = +3

Query: 558 GGGGKXXXXXXGGAPPPPPPXXXGXXXXGGGGGG 659
           GGGG       GGAP        G    GGGGGG
Sbjct: 203 GGGGSG-----GGAPGGGGGSSGGPGPGGGGGGG 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.153    0.537 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,171
Number of Sequences: 2352
Number of extensions: 15512
Number of successful extensions: 73
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 116341017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)