Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP08_F_D01
(899 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK223248-1|BAD96968.1| 488|Homo sapiens hypothetical protein FL... 49 2e-05
BC021277-1|AAH21277.1| 488|Homo sapiens transmembrane protein 3... 48 4e-05
BC003192-1|AAH03192.1| 146|Homo sapiens TMEM39A protein protein. 48 4e-05
AK222950-1|BAD96670.1| 488|Homo sapiens hypothetical protein FL... 48 4e-05
AK001764-1|BAA91893.1| 488|Homo sapiens protein ( Homo sapiens ... 48 4e-05
CR533536-1|CAG38567.1| 492|Homo sapiens FLJ10315 protein. 40 0.012
CR457311-1|CAG33592.1| 492|Homo sapiens FLJ10315 protein. 40 0.012
AL445248-4|CAH71947.1| 492|Homo sapiens transmembrane protein 3... 40 0.012
AK023331-1|BAB14530.1| 492|Homo sapiens protein ( Homo sapiens ... 40 0.012
AL445248-3|CAH71946.1| 192|Homo sapiens transmembrane protein 3... 40 0.016
>AK223248-1|BAD96968.1| 488|Homo sapiens hypothetical protein
FLJ10902 variant protein.
Length = 488
Score = 49.2 bits (112), Expect = 2e-05
Identities = 19/46 (41%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Frame = +3
Query: 558 DGPLLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNQAMNFY 689
DG LLFE L+F++ L A +Q++N+Y+T WW P ++ + ++NF+
Sbjct: 70 DGSLLFEFLLFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFH 115
>BC021277-1|AAH21277.1| 488|Homo sapiens transmembrane protein 39A
protein.
Length = 488
Score = 48.4 bits (110), Expect = 4e-05
Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = +3
Query: 558 DGPLLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNQAMNFY 689
DG LLFE L F++ L A +Q++N+Y+T WW P ++ + ++NF+
Sbjct: 70 DGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFH 115
>BC003192-1|AAH03192.1| 146|Homo sapiens TMEM39A protein protein.
Length = 146
Score = 48.4 bits (110), Expect = 4e-05
Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = +3
Query: 558 DGPLLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNQAMNFY 689
DG LLFE L F++ L A +Q++N+Y+T WW P ++ + ++NF+
Sbjct: 70 DGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFH 115
>AK222950-1|BAD96670.1| 488|Homo sapiens hypothetical protein
FLJ10902 variant protein.
Length = 488
Score = 48.4 bits (110), Expect = 4e-05
Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = +3
Query: 558 DGPLLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNQAMNFY 689
DG LLFE L F++ L A +Q++N+Y+T WW P ++ + ++NF+
Sbjct: 70 DGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFH 115
>AK001764-1|BAA91893.1| 488|Homo sapiens protein ( Homo sapiens
cDNA FLJ10902 fis, clone NT2RP5003534. ).
Length = 488
Score = 48.4 bits (110), Expect = 4e-05
Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Frame = +3
Query: 558 DGPLLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNQAMNFY 689
DG LLFE L F++ L A +Q++N+Y+T WW P ++ + ++NF+
Sbjct: 70 DGSLLFEFLFFIYLLVALFIQYINIYKTVWWYPYNHPASCTSLNFH 115
>CR533536-1|CAG38567.1| 492|Homo sapiens FLJ10315 protein.
Length = 492
Score = 39.9 bits (89), Expect = 0.012
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +3
Query: 567 LLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNQAMNFY 689
+LFE+ +F L A + ++N+Y+T WW P S+ ++ ++NF+
Sbjct: 78 ILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFH 120
>CR457311-1|CAG33592.1| 492|Homo sapiens FLJ10315 protein.
Length = 492
Score = 39.9 bits (89), Expect = 0.012
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +3
Query: 567 LLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNQAMNFY 689
+LFE+ +F L A + ++N+Y+T WW P S+ ++ ++NF+
Sbjct: 78 ILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFH 120
>AL445248-4|CAH71947.1| 492|Homo sapiens transmembrane protein 39B
protein.
Length = 492
Score = 39.9 bits (89), Expect = 0.012
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +3
Query: 567 LLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNQAMNFY 689
+LFE+ +F L A + ++N+Y+T WW P S+ ++ ++NF+
Sbjct: 78 ILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFH 120
>AK023331-1|BAB14530.1| 492|Homo sapiens protein ( Homo sapiens
cDNA FLJ13269 fis, clone OVARC1000984. ).
Length = 492
Score = 39.9 bits (89), Expect = 0.012
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +3
Query: 567 LLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSY--TNQAMNFY 689
+LFE+ +F L A + ++N+Y+T WW P S+ ++ ++NF+
Sbjct: 78 ILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLNFH 120
>AL445248-3|CAH71946.1| 192|Homo sapiens transmembrane protein 39B
protein.
Length = 192
Score = 39.5 bits (88), Expect = 0.016
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 567 LLFEVLMFMFTLAATGLQFLNLYRTTWWLPNSYTNQAMNFYPDRPTFGSFYNLLYY 734
+LFE+ +F L A + ++N+Y+T WW P S+ + R F ++L +
Sbjct: 78 ILFELQLFFCQLIALFVHYINIYKTVWWYPPSHPPSHTSLASQRGKVSLFRSILLF 133
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,843,866
Number of Sequences: 237096
Number of extensions: 2764813
Number of successful extensions: 12086
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12084
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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