Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_D01
         (899 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003151-11|AAO61426.1|  402|Caenorhabditis elegans Hypothetical...    58   1e-08
AF003151-10|AAK18913.2|  477|Caenorhabditis elegans Hypothetical...    58   1e-08
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr...    33   0.28 
AL023845-1|CAA19539.1|  298|Caenorhabditis elegans Hypothetical ...    33   0.28 
U29097-4|AAM98031.1|  308|Caenorhabditis elegans Hypothetical pr...    30   2.0  

>AF003151-11|AAO61426.1|  402|Caenorhabditis elegans Hypothetical
           protein D1007.5b protein.
          Length = 402

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
 Frame = +3

Query: 447 RQTRVTPNTAPTVTLADIKLAEGXXXXXXXXXXXXX-QDGPLLFEVLMFMFTLAATGLQF 623
           R+    P  AP+V  A I  A G                G L FE  +F++++ A  LQ+
Sbjct: 5   RRVPAPPPQAPSVP-ASIPRASGVTLSVHPIWPDIQFTQGELFFECTLFLYSVLALFLQY 63

Query: 624 LNLYRTTWWLPNSYTNQAMNFYPDRPTFGSFYNLL 728
           LN+Y+T WWLP SY + ++ F+   P F S   LL
Sbjct: 64  LNIYKTLWWLPKSYWHYSLKFHLINPYFLSCVGLL 98


>AF003151-10|AAK18913.2|  477|Caenorhabditis elegans Hypothetical
           protein D1007.5a protein.
          Length = 477

 Score = 57.6 bits (133), Expect = 1e-08
 Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
 Frame = +3

Query: 447 RQTRVTPNTAPTVTLADIKLAEGXXXXXXXXXXXXX-QDGPLLFEVLMFMFTLAATGLQF 623
           R+    P  AP+V  A I  A G                G L FE  +F++++ A  LQ+
Sbjct: 5   RRVPAPPPQAPSVP-ASIPRASGVTLSVHPIWPDIQFTQGELFFECTLFLYSVLALFLQY 63

Query: 624 LNLYRTTWWLPNSYTNQAMNFYPDRPTFGSFYNLL 728
           LN+Y+T WWLP SY + ++ F+   P F S   LL
Sbjct: 64  LNIYKTLWWLPKSYWHYSLKFHLINPYFLSCVGLL 98


>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical
           protein F52B5.3 protein.
          Length = 1425

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -3

Query: 243 QRLAKSIVRQPTIAGKKNTTKGPLSFSVQLITHMLKLLNIFTNK 112
           +R+A  I+R    +G+KNTT  P+    + + H + LLN  T K
Sbjct: 42  RRVANEIIRSFLKSGQKNTTLEPMGRDQRKVMHEVALLNEMTTK 85


>AL023845-1|CAA19539.1|  298|Caenorhabditis elegans Hypothetical
           protein Y51B9A.3 protein.
          Length = 298

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +2

Query: 233 ARRWANSQVSNTSSTAVSRRRKIIKDPLIKRPLPPIACKMVHPGAKKA 376
           AR+   + V+NT +  ++  R    DPL   PLPP   +    G KKA
Sbjct: 168 ARKLLYASVNNTKTVRLTLERSTNTDPLGPAPLPPDGAQSTAVGVKKA 215


>U29097-4|AAM98031.1|  308|Caenorhabditis elegans Hypothetical
           protein F18C5.4 protein.
          Length = 308

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +2

Query: 233 ARRWANSQVSNTSSTAVSRRRKIIKDPLIKRPLPPIACKMVHPGAKKA 376
           AR+   + V+NT +  ++  R    DPL   P PP   +    G KK+
Sbjct: 168 ARKLLYASVNNTKTVRLTLERSTTTDPLGPAPPPPDGAQSTPAGVKKS 215


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,670,541
Number of Sequences: 27780
Number of extensions: 419183
Number of successful extensions: 969
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)