Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP08_F_C24
         (981 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            33   0.013
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.37 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.86 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 33.1 bits (72), Expect = 0.013
 Identities = 27/80 (33%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
 Frame = +1

Query: 655 GGXGXPPPPXGGGXPXSPPXXGGIPPXKKTXXXXXAPXXGPXNPXK-RAPFXXGFXPXG- 828
           G  G PPPP  GG   + P     PP         AP   P NP + R P      P   
Sbjct: 526 GPLGPPPPPPPGGAVLNIPPQFLPPPLN----LLRAPFF-PLNPAQLRFPAGFPNLPNAQ 580

Query: 829 PPPPPXKXXKKXPPPXXXGG 888
           PPP P       PPP    G
Sbjct: 581 PPPAPPPPPPMGPPPSPLAG 600



 Score = 24.2 bits (50), Expect = 6.0
 Identities = 14/46 (30%), Positives = 14/46 (30%)
 Frame = +3

Query: 834 PPPGXXXXKXSAPXXXGGGXXPXGEXKKSXXFPPXXPPRXPPXVPP 971
           PPP         P        P G        PP  PP  PP  PP
Sbjct: 549 PPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPP 594


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 0.37
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -1

Query: 687 PXGGGGXXXSPXPGXXGGQG 628
           P GGGG    P PG  GG G
Sbjct: 212 PGGGGGSSGGPGPGGGGGGG 231



 Score = 24.2 bits (50), Expect = 6.0
 Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
 Frame = -1

Query: 687 PXGGGGXXXSPXPGXXGG-QGXXLXGXXGKGGPKN 586
           P  GGG      PG  GG  G    G  G GG ++
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRD 234


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 0.86
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -1

Query: 678 GGGXXXSPXPGXXGGQGXXLXGXXGKGG 595
           GGG    P  G  GG G    G  G GG
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGGSGG 867


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +1

Query: 646 SGXGGXGXPPPPXGGGXPXSPP 711
           SG  G   PP P  GG P  PP
Sbjct: 292 SGMVGPPRPPMPMQGGAPGGPP 313



 Score = 24.6 bits (51), Expect = 4.6
 Identities = 16/67 (23%), Positives = 16/67 (23%)
 Frame = +2

Query: 599 PFPXXPXNXXPXPPXXPGXGEXXXPPPPKGGXXRXXPQXXXXXXXXXXXXXXXXPPXXXP 778
           P P  P    P PP  P       PP    G                       PP   P
Sbjct: 209 PQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRP 268

Query: 779 XTPKKGP 799
             P  GP
Sbjct: 269 PNPMGGP 275


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,080
Number of Sequences: 2352
Number of extensions: 12278
Number of successful extensions: 53
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 107296839
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)